Gene Francci3_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0031 
Symbol 
ID3903606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp37685 
End bp38491 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID637877361 
Producthypothetical protein 
Protein accessionYP_479154 
Protein GI86738754 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCAT TCGCGTCGAA CACCCTCGCT CTCGGCCCTG GCGTCCTCAG CGCGGACAGC 
TTGGCCAAAG CGGGCCTGGC TGTCGTTCTG CTGATCGTCT TCGCGGAGTC CGGCCTACTG
GTCGGGTTCT TCCTCCCGGG TGACTCCGTG CTGTTCACCG TGGGTATGCT GATCGCCCGC
GACGAGCTTT CCACCCCGCT GCCGGTGGCG GCTGTCCTGA TCGGGCTCGC CGCGGTGACT
GGCGACCAGG TCGGCTACCT AATTGGTCGA AGAGTCGGTC CGGCGTTGTT CCGACGCCCC
GACTCGCGGC TGTTCAAACA GGAGTACGTC GAGCAGGCAC ACGAGTTCTT CGAGAAGTAC
GGGCCGCGGT CCATCATCCT GGCGCGGTTT GTTCCCGTGG TCCGCACCTT CACTCCGGTT
ATCGCCGGCG TGAGCCGGAT GAACTACCGC CTCTTCATCA CCTACAACAT CGTGGGCGGG
GTGGTCTGGG GTTGCGGCAT CACGGTTCTG GGTTTCTACC TCGGCAAGAT AGACTTTGTA
CGGAACAACA TTGAGCCGAT GTTGATTCTG ATTGTCGTCG TCTCGGTGCT TCCCATTGCT
TTCGAATTTC TCCGGGCCCG CCGTAGGAAG CGGGCCGGGA ACGGTGCCGT GCGGGAGGGC
TCCGCTGGAT TCGGCGGGAG TGCCCCGGTC GCCGACGAGG CTGAGACCTT CGCGGTACGG
CCACGCCGCG GCGGCGGGCG TCACTCGGTC GCCCATCAAC GTCAGACGCC GGGACTGACC
GAGGCTGATC GAGAAGACCG AGGCTGA
 
Protein sequence
MNAFASNTLA LGPGVLSADS LAKAGLAVVL LIVFAESGLL VGFFLPGDSV LFTVGMLIAR 
DELSTPLPVA AVLIGLAAVT GDQVGYLIGR RVGPALFRRP DSRLFKQEYV EQAHEFFEKY
GPRSIILARF VPVVRTFTPV IAGVSRMNYR LFITYNIVGG VVWGCGITVL GFYLGKIDFV
RNNIEPMLIL IVVVSVLPIA FEFLRARRRK RAGNGAVREG SAGFGGSAPV ADEAETFAVR
PRRGGGRHSV AHQRQTPGLT EADREDRG