Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0030 |
Symbol | |
ID | 3903605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 35871 |
End bp | 37199 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877360 |
Product | secretory lipase |
Protein accession | YP_479153 |
Protein GI | 86738753 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTCAG CGCGGTCAGC GCGGTCAGCG CGGTCAGGGA GACCGACGCG ACCGGCTGCG GGGGCCACCC CTGTCGGGGC GCACCGATGC CCTTCCCACC CGGTCCGTAC CCCGCTGCTC ATGGTCCTGC TTCTGCTCGG GCTCCTGCTC GGACTGCTGC CCCTTGCGGC CTGCGGAAAG CGGGATGGCA ACGACGGATC ATCCCCCGCA ATCAGTGCCG GCGGACCCGA TGAGCGAGGT GCATCGTTAC CACCGGGAAC CCGCGGGGAA ATTCTGTCCA GTCAGGTGGT CGCGCCGGCC CCGACCGGCA TCCGGGCGTG GCGGGTGATG TACCGATCCC ACGCGACGTC GGGCGTCGAC ATTCCGGTGT CCGGGATAAT CCTGGCCCCG GAGGAGAACG TTCCGGTTCC GCCGGGCGGC CGAAGAATCG TCGCGTTCGG GCATGGCACC ACGGGCCTCA AGGATGCCTG TGCACCGTCG GCGGCACGAC CCGCGCTGAT CGCCGCCGCC TCGACTTTTC CGCTCGTCCG GGCCGGTTAT GTCGTGGCCC TCACAGATTA TCCGGGGCTG GGGAGTCCCG GCGAACACGC GATCTATGTT GCCGAGCCGG AGGGCAGGGC CGTGCTTGAC GCGGCGCGCG CCGCCGCCGC CCTCAAGGCG ACCGGTGCCG GTCGCGACGT CGTCCTCTGG GGCTATTCGC AGGGCGGCCA GGCGGTGTTG GCCGCCGGAG CGATTGCCGC CGCCTACGCA CCCGAGCTAC GGATCCGGGG AGTCGTCGCA ACCGCCCCCC TGGCCGACCT GCCGGCGTCC CTCGCCACCT TGCAGCACAA TGCCGACGGG GTCGCCTATG TCCTGCTGGC GATGATCGGG CTGTCCGTCG AGGACCGGAC GATCAACCTG GACCGGGTAC TCACCCCGAC CGGCCGGCGA CTGCTGTCGA TCGCCCGCGA CCGCTGCGCC ACCGACCTCA TCAGGGCAAG CATCGGTACG TCCGTCAGCA CCGCCTTTAC CGTCAATCCA CTGGATCATC AGCCATTCGC AGCCGGATTC GCCCGGCAGC GAGAGGTGGC CCTGCGGAAG ATGGCTCCGA CCCTCGTTCT CCAGGGCGAC CTCGACCTGG TGATCCGACG CCCGGTGACC GACAGCGTGG TCACCGGGCT GTGCCGGAAG GGCACGACCG TGGACTACCG GCGTTACCCC GACGCGGACC ACGGCACCGT CCTCGGCGCA TCGATGGCCG AGCTCACCGC CTGGGTCGCG CAGCGCTTCG CCCCGCACCC GCCGCCGGTC ACCGACATCT GCGAGATGCG CGCAGCTCGG TTCGGATAA
|
Protein sequence | MRSARSARSA RSGRPTRPAA GATPVGAHRC PSHPVRTPLL MVLLLLGLLL GLLPLAACGK RDGNDGSSPA ISAGGPDERG ASLPPGTRGE ILSSQVVAPA PTGIRAWRVM YRSHATSGVD IPVSGIILAP EENVPVPPGG RRIVAFGHGT TGLKDACAPS AARPALIAAA STFPLVRAGY VVALTDYPGL GSPGEHAIYV AEPEGRAVLD AARAAAALKA TGAGRDVVLW GYSQGGQAVL AAGAIAAAYA PELRIRGVVA TAPLADLPAS LATLQHNADG VAYVLLAMIG LSVEDRTINL DRVLTPTGRR LLSIARDRCA TDLIRASIGT SVSTAFTVNP LDHQPFAAGF ARQREVALRK MAPTLVLQGD LDLVIRRPVT DSVVTGLCRK GTTVDYRRYP DADHGTVLGA SMAELTAWVA QRFAPHPPPV TDICEMRAAR FG
|
| |