| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0022 |
|---|
| Symbol | |
|---|
| ID | 3903597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 30046 |
|---|
| End bp | 30873 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637877352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_479145 |
|---|
| Protein GI | 86738745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.724418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACC TGTCCCGGAT CTGGCTGAAC CCGCTGCGCA CCGGCGCCCA GGCGCTACTG
AAGAACCCCC AGCGCATGCA CGCCGCCGTC CTCGGCGGGC TCAGCCGCCA ACCCGTCACC
GAACGGGTCC TGTGGCGACT GGAAACCGGT GAAGGCCTCC GTGGAGCAGA CCGACCGCAC
CGCGCCGAAG TCCTCGTTCT CACCGAATCC ACGCCGTCCT GGGAGCACCT CATCGAACAG
GCCGGCTGGA TCCACACCGA CGAACCCCAG GTCCTCGTCC GCGACTACCA GCCCCTGCTC
GACCGCCTCC ACACCGGCCG CGAATTCCGC TTCCGGCTGC GCGCGAACAC TGTCAGCGCC
ACCCGCACCC CCGACAATCC CTCCCCTGCC CAGAAGGAAC ACCTCGCCGC CCCCCGCCCC
CGCGGTGTCC GCGTCGGCCA CCGCACCGCC GCCCACCAGA CGACCTGGCT CACTGACCGC
ATCGACCGCT GGGGATTCAC CCTGCTCACC ACCGCCGACC TCGATGGCCC CCGCAACCAG
CCCGATGGCC CCCGCAACCA GCCCGACGGC CCCGGCGACA CCGACGAGCC GGCCCCCGCG
CTACGGCTCA CCGCCCGCGA ACGCCTCACC TTCCCCAAGA AAGCCAAGAA CACCGAGAAG
ACTGGCCGCC GCGTCGTCCT CAACACCGCC ACCTTCGAAG GCGCCCTGCG CGTCACCGAT
CCCGCCCGCG CCCGCGCCAC TCTCCTGCAC GGCGTCGGCC CTGCCAAGGC CTACGGCTGC
GGGCTGATCA CCCTCGCGCC CCTGCACACC GAACAGGCCG GCCGCTGA
|
|---|
| Protein sequence | MTYLSRIWLN PLRTGAQALL KNPQRMHAAV LGGLSRQPVT ERVLWRLETG EGLRGADRPH
RAEVLVLTES TPSWEHLIEQ AGWIHTDEPQ VLVRDYQPLL DRLHTGREFR FRLRANTVSA
TRTPDNPSPA QKEHLAAPRP RGVRVGHRTA AHQTTWLTDR IDRWGFTLLT TADLDGPRNQ
PDGPRNQPDG PGDTDEPAPA LRLTARERLT FPKKAKNTEK TGRRVVLNTA TFEGALRVTD
PARARATLLH GVGPAKAYGC GLITLAPLHT EQAGR
|
|---|
| |