Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0019 |
Symbol | |
ID | 3903594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 27358 |
End bp | 27978 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637877349 |
Product | hypothetical protein |
Protein accession | YP_479142 |
Protein GI | 86738742 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.570283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGG TAACCGCGGC GCCGTCCGCA TCGTCCACAT CATCCGAGAC GACATCGCCA CGCGAGACGA CATCGCCACG GCACTTCTGG GAACGGGACC ATAAGGGCGA CCGGCCCGAC GGGGCGGATT TGGCCGTGTT GCGCCGCGGT GTTGGCCGCG AGCCTGGCAG CGTCCCGGAG ATGTGGCGCT ACTACTCCAC GCTCACCGTC GATGGCCGCA GAACCTGGTC CCTGACCGCG GAGCACGTCG CGCTCACCTT GTTCGCGGTG CACCAGCAGT CCCTGCCCAC TGCGGCGTAT CAGCCTGGCA TCGGGCTCGG CGAGGCTGCT CTACGCCTGC GTAGCAGCGA CAAGTTCAGT CCTGAGGCGG TCGACCGGCG GTTCAACGCC GTGGCCACCG CCACCACCCT GGACGAGGCC GCCTACCACC TGCGTGGTCT GGTCCGCCAG TTCCGCCAGG TCCCCGTCGG TCTCGACTAC ACCCAACTCT GGCGGGACCT CATCGCCTGG CAGACCCCCG AGCGGATCGG CGACGTACGC CGCCGGTGGG GAGCCCAGTA CTTCTACCGG CCCCCGAAAG ACAAAGCCGC TACCCCGGCC GCCGCGTCCG GCACTTCCTG A
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Protein sequence | MTEVTAAPSA SSTSSETTSP RETTSPRHFW ERDHKGDRPD GADLAVLRRG VGREPGSVPE MWRYYSTLTV DGRRTWSLTA EHVALTLFAV HQQSLPTAAY QPGIGLGEAA LRLRSSDKFS PEAVDRRFNA VATATTLDEA AYHLRGLVRQ FRQVPVGLDY TQLWRDLIAW QTPERIGDVR RRWGAQYFYR PPKDKAATPA AASGTS
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