Gene Francci3_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0016 
Symbol 
ID3902963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp20624 
End bp22171 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content69% 
IMG OID637877346 
Productacyltransferase 3 
Protein accessionYP_479139 
Protein GI86738739 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGTCCC TTACCCCGAA GCCAGGTCAT GACCACACCA GGCGGACCTC GAAACATCGT 
GCCGAGGTCC CGGGTTCTGC CCGCGCCGGC TCTCCCGTCC TGGTGGGCGC AGCCCCCGCC
GCCGCCGCCG CCGGTGCCGC CGCCGCCGGT GCCGCCGCCG CCGGTGCCGC CGCCGCCAGT
GCCGCCGCCG CCAGTGCCGC CGCCGAGAGA GCGGCCGACC GTGCCGGTCC GGACCTCGGC
CCGGCCGCGG GCCGGGGGGT GGGTATCACC GGAGAGAGCG GAGGGAACCG CCGCGGTCGC
CGACGGACGA CGGTGGGCGA TCCCAGGCTC GAGCTGGTCG ACCTGGGCGG GTTCCGCGGC
GTGGCGGCGA TCTCAGTGAT CATTTTTCAC GCCTATCAGT TCTGCCGCGG GGATGGCAAC
ACGCCGTACG CGGGTACGTT CCTCGGCCAG GTCCTCGGCG CCTTCGACGG GATGATCAGT
TGGTTCTTCC TGGTCTCCGG GTTCCTGCTG TATATGCCGA TGGCGAACCG GGTCAGGGCC
GGCCGGACCC AACGGTCACC CAAGAACACG CTCATACGTC GTGGACTGCG GATTCTTCCG
CTGTACTACA CGGCGCTCAT CGTCGTGTGG GCGGCGCGTA ATCCCACTCT GCCCGGCGAC
TGGATCGACC TGGTCGAACA CCTGACCTTC ACCCAGGTCT TCGACAGCAA GCGGGTGTTC
TACACGATCG GCCCGGCCTG GTCGCTGGCC GTCGAGGTCT ACTTCTATCT ATACCTCGCC
CTGGTCGCCG GCTGGCTGCG GCGGCAGACT CATCGACTAC CCGAGGCGCA TCGCTGGCGG
CGGCTCTGCC TGCCGCCGGT CCTGCTGATC GTGGTGTCCG CCGTCTGGAT CGTCTATGCG
GTCTACATCG TGCGGGCTCA GCACGACCAG TGGGCGTACT GGTTCTCGCC GCAGAACTAT
GCCGGCAACT TCGGCCTCGG AATGATCACT GCGGTTCTCT ATGTCCGATG GGGTCGGGAG
CGGCCGTTGC CCGCCCTGCT CGCGTGTGCG TTGCGGTTTG TCGCCGCCGG GCTCATCATC
GCCGGCGCGC TGGTCCGGGG GCACACCGCG GCATCGTTCG AGGCGTTCTC CACGCTGAAT
TCAATCGGTT TCGGTGTGCT GTTCGCCGCA TCCGTGCTGG CACCCCGCGA CACGCTGTGG
CGCCGGTTCT TCGCCACCCC GGCATTCGTC TGGCTCGGCA TGATCAGCTA CAGCGTGTAT
CTGTGGCATG AGCCGATTCT GCTGCTGGTG CTGGACCGGC ACGGGCTGGT CAGTCATGCG
CCGTCGGCGT TTCCGTGGGT GGCCGCCATG CTGGTCACGG TCGGCGTCCT CGGTGGATGG
ATCAGCTACG TCGTCCTGGA GAAACCGGGC CGCCGGCTGT CCATCCTGGT GGAGAAGCTC
CGCCGCACCC CGGTGTCCGC CTCGGTGTCC CCCGCCTTGG TGTCCCCCGC CCCGGTGTCC
CCCGCCCCGG TGTCCACCCC GGTGCGACCG GCACGGCCAG TTCCCTGA
 
Protein sequence
MWSLTPKPGH DHTRRTSKHR AEVPGSARAG SPVLVGAAPA AAAAGAAAAG AAAAGAAAAS 
AAAASAAAER AADRAGPDLG PAAGRGVGIT GESGGNRRGR RRTTVGDPRL ELVDLGGFRG
VAAISVIIFH AYQFCRGDGN TPYAGTFLGQ VLGAFDGMIS WFFLVSGFLL YMPMANRVRA
GRTQRSPKNT LIRRGLRILP LYYTALIVVW AARNPTLPGD WIDLVEHLTF TQVFDSKRVF
YTIGPAWSLA VEVYFYLYLA LVAGWLRRQT HRLPEAHRWR RLCLPPVLLI VVSAVWIVYA
VYIVRAQHDQ WAYWFSPQNY AGNFGLGMIT AVLYVRWGRE RPLPALLACA LRFVAAGLII
AGALVRGHTA ASFEAFSTLN SIGFGVLFAA SVLAPRDTLW RRFFATPAFV WLGMISYSVY
LWHEPILLLV LDRHGLVSHA PSAFPWVAAM LVTVGVLGGW ISYVVLEKPG RRLSILVEKL
RRTPVSASVS PALVSPAPVS PAPVSTPVRP ARPVP