Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0014 |
Symbol | |
ID | 3902961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 17127 |
End bp | 17819 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637877344 |
Product | peptide deformylase |
Protein accession | YP_479137 |
Protein GI | 86738737 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCA TGGCCTCGCG CTTGACGCGA TCTGACGAGA AGGACGAGAA GGACGAGAAG ATCGATCGGC GGGTCCGGGT GCTGGGGGAG CCGGTGGACT CCTACCCCCA GCTGCCGCCG GAGGTCGGCC GCGGTTCCAT CCGCAGGATC ACCGTTGTCG GCGAGCCTGT TCTGCACCGG CCCTGTAAGA AAATCACCGA GTTCGGGACC GCGGAGCTCG CTGCGCTGAT CGATGACATG TTCACCACCA TGTACGGCGC CGAAGGTGTC GGACTCGCCG CGAACCAGAT CGACGTCGAC GCCGCGGTCT TCGTCTATGA CTGCACCGAC GAGGACGGTG TGCGGCACGT GGGCCATCTG GTCAACCCCG TCCTGGAGGA GGCGCCGCCG GCGGAGCGCC GGCTCGTCAA GGGGGATGAG GGGTGCCTGT CTGTTCCGGG GGCCTACATG GAGGTCGCCC GGCTGGAGCA TGCTGCTGTC CGCGGTCAGG ACCAGCACGG TGCCCCGCTC CGCCTGGAGG GAACCGGCTA TTTCGCCCGT TGCCTGCAGC ATGAGACCGA TCACCTGTAC GGCAGCCTCT ACCTGGACCG GCTGTCGAGC CGCGGACGCA AGAAGGCCCT CCGCGAGATG GAGGAGCGGA CCGAGGAGAT CTTCGCCCGC CGGGTCGAGG TGGCCGCGCG GCTCGGCAGG TAG
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Protein sequence | MLAMASRLTR SDEKDEKDEK IDRRVRVLGE PVDSYPQLPP EVGRGSIRRI TVVGEPVLHR PCKKITEFGT AELAALIDDM FTTMYGAEGV GLAANQIDVD AAVFVYDCTD EDGVRHVGHL VNPVLEEAPP AERRLVKGDE GCLSVPGAYM EVARLEHAAV RGQDQHGAPL RLEGTGYFAR CLQHETDHLY GSLYLDRLSS RGRKKALREM EERTEEIFAR RVEVAARLGR
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