| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0006 |
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| Symbol | gyrB |
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| ID | 3902952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5916 |
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| End bp | 7955 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637877335 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_479129 |
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| Protein GI | 86738729 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.216936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGTGG CGCTGCGCAG ACGCCAGGGG GCTCCCTGCG TCCGCTATGG CGGGTTGCCG
GGTAGACTGG TGGATACTTC CGCCCAGAAC GAGGGGACCC GCCGCGTGGC CTACGATGCA
AGTTCGATCA AGGTTCTCGA AGGTCTTGAC GCGGTCCGCA AGCGTCCGGG CATGTACATC
GGCTCCACTG GAGAGCGTGG ACTGCATCAT CTCGTCTACG AGGTCGTGGA CAACGCGGTG
GACGAGGCGC TCGCCGGTTA CTGCGACACC ATCACCGTGA CGCTGCTTGC CGACGGCGGG
GTGCGGGTCA CCGACAACGG CCGTGGCATT CCCGTCGGCA TGCATCCCAC CGAGAAGCGG
CCCGCCGTCG AGGTCGTGCT GACCACCCTG CACGCCGGCG GGAAGTTCGA CGGCAAATCG
TACGCGGTGT CCGGCGGGCT GCACGGAGTC GGCGTCAGCG TGGTCAACGC GCTGTCCACC
CGGCTCGACG TGGAGATCCA CCTGGATGGG CACGTCTGGT TCCAGCCGTA CGTGGCGACC
CGCCCGGACA AGCCGCTGGC CAAGACCGGT ACCACCCGCA GGACCGGGAC GTCGGTCACC
TTCTGGGCGG ATCCGACGAT CTTCGAGACC ACCGAGTACA AGTACGAGAC GCTCTCCCGC
CGCCTGCAGG AGATGGCCTT CCTGAACAAG GGGCTGTCGA TCACGCTCGT CGACGAGCGT
GACGAGGAAC GCGTGGCGGT CACCTACAAG TACGCCAACG GCCTGGTCGA CTTCGTCGGT
CACCTCAACG CCACGAAGGA CACCATCCAC CGCAGCGTGA TCTCGCTGGA GTCGAAGGGC
GTGGGCATCG AGGCCGAGCT CGCGATGCAG TGGAACGGCG GCTACACCGA GTCGGTCTAC
ACCTTCGCGA ACACCATCAA CACCCACGAG GGCGGCACCC ACGAGGAGGG CTTCCGGGCC
GCGCTGACCA GCGCCGTCAA CGCCTACGCC AAGGACCAGA ACCTGCTCAA GCCGGTGAAG
GCGGGGGCCA AGAACAGCGA CGAGCGGCTC TCCGGCGACG ACATCCGGGA GGGCCTTACC
GCGATCATCT CGGTGAAGCT CGCGCAGCCG CAGTTCGAGG GCCAGACCAA GACCAAGCTC
GGCAACACCG AGGCCAAGAA GTTCGTCCAG GAGATGTGCT ACTCAGCGCT CAAGGACTGG
TTCGAGGTCA ACCGCACCGA GGCTCGGGCC ATCGTCAGCA AGGCGCTCGA CGCCCAGCGG
GCCCGCATTG CCGCCCGTCA GGCCCGCGAT CTGACCCGGC GCAAGGGTCT GCTCGGCGGC
ACCGGCCTGC CGGGCAAGCT CGCCGACTGC CAGTACACCG ATCCCGAGCG GTGCGAGCTG
TACATCGTCG AGGGTGACTC GGCGGGTGGG TCGGCCAAGG GTGGTCGAGA CTCGAAGTTC
CAGGCGATCC TCCCGCTGCG AGGAAAGATC CTCAACGTCG AGAAGGCCCG CATCGACCGC
GTTCTGAAGA ACACCGAGGT CCAGGCCCTC ATCCAGGCGC TGGGTACCGG CATCCACGAC
GATTTCGACA TCGCGAAACT GCGCTACCAC AAGATCGTTC TGATGGCGGA CGCCGACGTC
GACGGCCAGC ACATCCGGAC CCTGCTGCTG ACGCTGCTGT TCCGGTTCAT GCGCCCGCTG
GTCGAGGCCG GTCACGTGTT TCTGGCGCAG CCGCCGCTCT ACAAGATCAA ATGGGGTAGG
GAGGACTGGG AGTACGCCTA CTCCGATCGG GAGCGCGACG GGCTGGTCGC CCGCGGGGTG
GAGTCCGGGC GCAAGCTGCC CAAGGATGCC ATCCAGCGCT TCAAGGGTCT CGGCGAGATG
AACGCCACCG AGCTGTGGGA CACCACCATG GACCCGGACC GGCGCATCCT GCTGCAGGTC
ACGCTCGACG ACGCGGCGGT CGCCGACGAG TTGTTCTCCG TGCTCATGGG TGAGGATGTC
GACGCGCGTC GCAGCTTCAT CCAACGTAAT GCCAAGGACG TGCGTTTCCT GGACATCTGA
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| Protein sequence | MCVALRRRQG APCVRYGGLP GRLVDTSAQN EGTRRVAYDA SSIKVLEGLD AVRKRPGMYI
GSTGERGLHH LVYEVVDNAV DEALAGYCDT ITVTLLADGG VRVTDNGRGI PVGMHPTEKR
PAVEVVLTTL HAGGKFDGKS YAVSGGLHGV GVSVVNALST RLDVEIHLDG HVWFQPYVAT
RPDKPLAKTG TTRRTGTSVT FWADPTIFET TEYKYETLSR RLQEMAFLNK GLSITLVDER
DEERVAVTYK YANGLVDFVG HLNATKDTIH RSVISLESKG VGIEAELAMQ WNGGYTESVY
TFANTINTHE GGTHEEGFRA ALTSAVNAYA KDQNLLKPVK AGAKNSDERL SGDDIREGLT
AIISVKLAQP QFEGQTKTKL GNTEAKKFVQ EMCYSALKDW FEVNRTEARA IVSKALDAQR
ARIAARQARD LTRRKGLLGG TGLPGKLADC QYTDPERCEL YIVEGDSAGG SAKGGRDSKF
QAILPLRGKI LNVEKARIDR VLKNTEVQAL IQALGTGIHD DFDIAKLRYH KIVLMADADV
DGQHIRTLLL TLLFRFMRPL VEAGHVFLAQ PPLYKIKWGR EDWEYAYSDR ERDGLVARGV
ESGRKLPKDA IQRFKGLGEM NATELWDTTM DPDRRILLQV TLDDAAVADE LFSVLMGEDV
DARRSFIQRN AKDVRFLDI
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