Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0003 |
Symbol | |
ID | 3902949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2488 |
End bp | 3696 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877332 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_479126 |
Protein GI | 86738726 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000138278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCC GGGTGGAACG GGACGAATTC ACCGAAGCGG TCGCCTGGAC CGCACGCACG TTGCCGAGCC GGCCGACCAC CCAGTTGCAG GTGCTCTCGG GCCTGCTCCT CGACGCGACC GGACCGATAC TCAAGATCGC CGCGTACGAC TACGAGGTGG CCGCCCAGTG CACGGTGCAC GCGACCGTGT CGGAGGAGGG GCGCGGGCTC GTCAACGGCA AACTGCTCGC GGAGATCACC CGGGCGCTGC CCGCGGCACC GGTCGATCTG GGCATCGACG GCACCCGCCT GGTGATCACT TGTGGCAATG CTCGGTTCGC GTTGCCGATG CTGCCGGTGG ACGACTATCC CGCCCTTCCG GCCATGCCCC CGATCACGGG GCACATCGAG GGATCCGCGT TCGCCGCGGC GGTCTCACAG GTGGCGATCG CGGCCGGTCG TGACGACACG CTGCCGGTCC TCACCGGGGT CCGTATCGAG ATCGAGGGGG ACACTCTCAC CCTCGCCGCG ACCGACCGTT ACCGGCTCGC CGTGCGGACG TTGAAGTGGC GGCCGTCGGA GACAGCCGCC GGGCCCGATG AGGACGGCGT GACCGGTGTG GACGGCCCCC CGCCCACACC GGTCACTGTC GCTCTCGTGC CGGCCCGCAC CCTGCTCGAC ACCGCGAAGT CGTTGTCGGG TTCGGGGGTG GAGGTATCCA TCGCGCTCGG GACCGGCCCC TCCGGCGAGA CGCTGGCCGG TTTCGCCGGC TCGACCCGGC AGACGACGAC CCGGTTGCTC GACGGAAGCT TCCCGCCCTA CCGCAAGCTG TTGCCTGACA GTTCGCCGTT GATCGCGCAG CTGGAGATCG CCCCGTTGCA GGAGGCCGTC AAACGGGTGG CGCTGGTCGC CGCGAAGACC GCACCGGTGC AGCTGACGTT CTCCCCGGAC CACCTCGTGC TGGAGGCCGG GACGGGCGGT GAGGCGCAGG CGACGGAGAC CCTCCCGGTG ACCTACGACG GACCGGAGCT GTCCGTGGCG TTCAACCCGT CGTACCTGCT CGACGCACTC GGGGCGCTGG AGTCGGACGT CGTACGGATC GGTTTCGCCA GCGCGGAGGA CCCGGCGGTG GCGGCGAACA AGCCGGCGAT CCTGACCGGG AAGGCCGACG ACGACGGCGA GGTCCCCGAC TACCGGTACC TGCTGATGCC GATCCGCCTG CACGGGTGA
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Protein sequence | MKFRVERDEF TEAVAWTART LPSRPTTQLQ VLSGLLLDAT GPILKIAAYD YEVAAQCTVH ATVSEEGRGL VNGKLLAEIT RALPAAPVDL GIDGTRLVIT CGNARFALPM LPVDDYPALP AMPPITGHIE GSAFAAAVSQ VAIAAGRDDT LPVLTGVRIE IEGDTLTLAA TDRYRLAVRT LKWRPSETAA GPDEDGVTGV DGPPPTPVTV ALVPARTLLD TAKSLSGSGV EVSIALGTGP SGETLAGFAG STRQTTTRLL DGSFPPYRKL LPDSSPLIAQ LEIAPLQEAV KRVALVAAKT APVQLTFSPD HLVLEAGTGG EAQATETLPV TYDGPELSVA FNPSYLLDAL GALESDVVRI GFASAEDPAV AANKPAILTG KADDDGEVPD YRYLLMPIRL HG
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