Gene Fnod_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1709 
Symbol 
ID5452653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1860536 
End bp1861861 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content37% 
IMG OID640875478 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_001411201 
Protein GI154250376 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCAA TAAATTTTGA AGAATTCAAA GAAAAAATAT TTGTTCTTGC AAAGGAAAAA 
GGTGTAGAAG TACAGATTAG TTATTCAAAA TCAAGAAATT TCCAAGTGAG ATATCAAAAC
GGTGAGATGG ACCAATATAC AGACGCAGGG AAGTTTAGGA TAAACGTTCA AGTCCTTAAA
GATGGGAAAA TCGGCATGTC TTACACGGAA ACACTCGATA ATCCAGAAAA AGTTTTTATA
GACGCATACG AAAATATTTC GATTGTAGAC ACAGAAGATA TAGAATACTT TTACGATGGG
AAAGGAACGT ACCCAAACAT TGAACCTTAC AATGGGGCTT TTGAAACTCT CTCCGTGAAA
GAAAGATTGA ATTACGTTGA GATAGCTCAC AGAAAAGTTA GAGAAGACGA AAGAATTATA
AACGATATGG CCGTATACGG AGACCAAATG AGCGAATCAA AGATAGTAAA CACCCTTGGA
CTTGATGTTT CATTCGTCAG TGGTGGAGGT TTTATGTACG CAATGGCAGT GGCAAAAGAT
GTATCACCAA GATCCGCTTT TGAATTTGCT ATTGGTAAAA AACCAGAAGA AATAAATCCC
ACGCACGTTG GCGAGAGAGC AAAAGATGAA GCAATCACTT TAATCGGTTC GAAATCGGTA
AAGAGTGGAA AGTACAGAGT TATACTAAGA AACGACGTAT TTTCCGACAT TTTAGGCATG
CTTGTGTCTA TGATAAATGC TGATAATGCG CATAAAAACT TGTCACCACT CAAAGGTAAA
ATTGGCGAAA AAATCGCTTC CGAAAAGTTT ACAGTAAAAG ACTTACCAGT ACATGAACTG
AGTATTGTCG CCACGCCATT CGACTCACAA GGTGTACCCA CAAAAGAAAA AGTTATTATT
GAAAATGGAG TGTTTAAGAC ATTCCTCCAT AATCTAAAAA CAGCCAAAAA AGATAACGTT
GAGCCAACGG GAAACGCATA TGGGACAAGT ATAGCACCTA TAAATCTTTA CGTAGAGCCT
GGAGAAAAGA ATTTTGAAGA GCTTCTTGAA ACCCTTGATA ATGGAATAGT AATCATCGAA
GTTGAAGGTA TGCACTCTGG CGCAAATCCA ATATCAGGTA ATTTCTCCTT AGGTGCGAAA
GGACTAAAAG TAGAAAACGG TAAGATTGTT CATGGAGTTG AACAGGTAAC AATTTCTGGT
AACTTCCTTG AAATAATGCA CAAAATTGAA GAAGTTGGAA ACGATTTGAG GGGCTTTATC
GGTATGAATG GAATGATTGT ACCATCTGTT CTAATAAGTG AACTTGATAT AGCTGGAAAT
GCATAA
 
Protein sequence
MRPINFEEFK EKIFVLAKEK GVEVQISYSK SRNFQVRYQN GEMDQYTDAG KFRINVQVLK 
DGKIGMSYTE TLDNPEKVFI DAYENISIVD TEDIEYFYDG KGTYPNIEPY NGAFETLSVK
ERLNYVEIAH RKVREDERII NDMAVYGDQM SESKIVNTLG LDVSFVSGGG FMYAMAVAKD
VSPRSAFEFA IGKKPEEINP THVGERAKDE AITLIGSKSV KSGKYRVILR NDVFSDILGM
LVSMINADNA HKNLSPLKGK IGEKIASEKF TVKDLPVHEL SIVATPFDSQ GVPTKEKVII
ENGVFKTFLH NLKTAKKDNV EPTGNAYGTS IAPINLYVEP GEKNFEELLE TLDNGIVIIE
VEGMHSGANP ISGNFSLGAK GLKVENGKIV HGVEQVTISG NFLEIMHKIE EVGNDLRGFI
GMNGMIVPSV LISELDIAGN A