Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1638 |
Symbol | |
ID | 5452784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1783327 |
End bp | 1784127 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640875407 |
Product | iron ABC transporter substrate-binding protein |
Protein accession | YP_001411130 |
Protein GI | 154250305 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGCGG AAAAACAAAA CCCACAAGCT TCGATATGGG TTGGTGGAGT TGGTGTCTTT CACGTTGAAG CAAAATTAAA AGGTTTAACC ACGCCATACA GAGCTCCCTA CAGTCAATTC ATTGATGAAA AATTTAAAGA TCCAGATGGT TACTGGATAG GACTTTACGT GGGGCCATTA GCTTTTGCAA CAAACAAGAA CAAAGCAAAA GAGCTCGGAA TTAATCCTCC AATAAGTTGG GCAGATTTAC TCAAACCTGA GTACAAAGGA TTAATTAGAA TGGCTAACCC AAACACATCT GGTACAGCTT ACAACGTTAT TACAACACTT GTAAACATCT ACAAAAGAGA TGAAGCTAAA GTTTTTGATT ATTTGAAAAA GCTTGATGCA AACGTCAACA TGTACACAAA ATCAGGTTCA GCACCAGGAA AAGATTGTGC AATTGGTGAA ACAACTATAG CTATTGGTTA TTTACATGAC TTAGTAAAAC TACAAAAAGA AGGTGCACCG ATTGTTATAA CACTACCAAG AGAAGGAACC GGCTACGAAA TAGCAGCTAT GTCACTTATA AAAGGTGGAA AAGAACCTCT TGAAGCTAAA AAATTGTACA ACTGGATACT TGGGGATAAG GCACAAGCAA TTATCGCAAG TTGGTATGTT ATACCACTTT CACCAAAAGC TCCAAAAAAT AAATTAGTTT ACAAACTTGA AGATATAAAC CTAATTCAAC AAGATTTACT CTGGGAAGCT CAAAATAGAG AGAGGTTAGT AGAAAAATGG AACAAAGAAA TTGGAAAATA A
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Protein sequence | MEAEKQNPQA SIWVGGVGVF HVEAKLKGLT TPYRAPYSQF IDEKFKDPDG YWIGLYVGPL AFATNKNKAK ELGINPPISW ADLLKPEYKG LIRMANPNTS GTAYNVITTL VNIYKRDEAK VFDYLKKLDA NVNMYTKSGS APGKDCAIGE TTIAIGYLHD LVKLQKEGAP IVITLPREGT GYEIAAMSLI KGGKEPLEAK KLYNWILGDK AQAIIASWYV IPLSPKAPKN KLVYKLEDIN LIQQDLLWEA QNRERLVEKW NKEIGK
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