| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1608 |
|---|
| Symbol | |
|---|
| ID | 5451574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1755924 |
|---|
| End bp | 1756787 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640875384 |
|---|
| Product | ferredoxin-NADP(+) reductase subunit alpha |
|---|
| Protein accession | YP_001411107 |
|---|
| Protein GI | 154250282 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG AAGAGCTTAA CAACGTGATA TTGCGTAAGC GTAAATTAGC CTACGGAGTT
CATGATGTCT GGATTAAAAA TGATCTCATT GGTAGACAAG CTAAACCTGG TCAGTTTGTT
ATAGTGAGGA TAAGTGAAAA AGGCGAACGC ATACCTCTAA CGATAGCCGA GTCCAATGGT
GAAGCGTTCA GAATCGTTGT CAAAGCGGTT GGGAAATCCA CATACGAACT GTGCTCGCTC
AACGAAGGCG ATATACTTTA CGATGTAGTT GGACCACTCG GTAAGCCAAG TGAAATTAAG
TATCATGGAA ACGTACTAAT AATCGGTGGT GGAGTTGGAA TAGCCGCTAT ATTACCAATT
GCAAAAGCGC TAAAAAGTGC AGGCAACAAC ATAACAGTTA TAATTGGAGC AAGAACAATC
CAAGATTTGA TATTAAGAGA TGAATTCACA TTTGCCGATA AACTTTTACC AACAACAGAC
GATGGAAGTT TCGGATACAA AGGTAACGTG ATAGATGCCA TGAAAATCGA GCTTGAAAAA
GAAAATTACA ACGTAATTTG GTCGATAGGA CCAGCTATCA TGATGAAACT TTCAAGTGAA
ATTGCCACAA AATACAACAT TCCCATTTGG GTTTCGTTGA ATTCTATCAT GATAGATGGT
ACTGGTATGT GTGGTGGTTG CCGAACGGTG ATAAAAACTG ATAATTCCGA AAAGATACAG
TACGTATGCG TTGATGGACC AGAATTCGAT GGTAGATACG TTGATTGGGA TAGCTTCATC
AAAAGGCTAA ACCAATACAA AGAACAAGAA AAATTGGCTC TTGAAAGATA TCTGAAAGAA
GTTGGTGAAC CTACATGGCT GTGA
|
|---|
| Protein sequence | MNQEELNNVI LRKRKLAYGV HDVWIKNDLI GRQAKPGQFV IVRISEKGER IPLTIAESNG
EAFRIVVKAV GKSTYELCSL NEGDILYDVV GPLGKPSEIK YHGNVLIIGG GVGIAAILPI
AKALKSAGNN ITVIIGARTI QDLILRDEFT FADKLLPTTD DGSFGYKGNV IDAMKIELEK
ENYNVIWSIG PAIMMKLSSE IATKYNIPIW VSLNSIMIDG TGMCGGCRTV IKTDNSEKIQ
YVCVDGPEFD GRYVDWDSFI KRLNQYKEQE KLALERYLKE VGEPTWL
|
|---|
| |