| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1599 |
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| Symbol | |
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| ID | 5451650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1746102 |
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| End bp | 1748246 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640875375 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001411098 |
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| Protein GI | 154250273 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.367707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGT TAGATATTGA AAAGGTCATT AGTCAGATGA CCCTTGAAGA AAAGATACAC
TTTGTTGTTG GTGTTGGTGT ACTTGGAATT GAAGACAATC CAAAAGCACG TGTCAGTGGT
GCTGCAGGTG AGACTTTTGA AATTCCAAGA CTTGGAATTC CAAGAACCGT TTACGCAGAT
GGGCCAGCAG GTTTGAGAAT AGATCCAGAA AGGGAAAGTG ATGAAAGAAA ATACCATGCA
ACAGCGTTTC CAGTTGAAAC GATGCTTGCT TCAACGTGGA ATAAGAACAT TTTGAAAAAA
GTGGGAGAGG CGATGGGCGA AGAGGTGAGA GAGTACGGAG TTGATGTGTT ACTGGCTCCG
GCTATAAATA TACACAGAAA CCCACTGTGC GGTAGGAATT TCGAGTACTA TTCAGAAGAC
CCATTATTGA CCGGTGAACT GGCAGCAAGT TTTGTTGAAG GTGTACAATC ACAAGGTGTT
GGTGCTTGTT TGAAGCATTT CGTTGTCAAT GAACAAGAGA CCAATAGAAT GACTGTAGAT
ACAATCGTTT CTGAAAGAGC ATTAAGGGAA ATTTATCTTA AGCCATTTGA AATCGCAATT
AAGAAATCTA AGCCATGGAC AGTGATGAGT TCTTACAACA AATTGAACGG TTATTACACC
TCTCAGAACA GTTGGCTTTT AACGAAAGTT TTGAGATACG AATGGCAATT CGATGGTTTT
GTTATGACAG ATTGGTTTGC CGGTGATGAT GGAGCTAAAC AGATGGCTGC AGGTAATGAT
TTAATCATGC CAGGAAAGAG CCACCAGGTT TTGAAACACA GAAGAAATGA GATAGATGAT
ATAAGAAAGG CTATTGAGAA TGGAGAGCTA ACAGAAGAGG TACTCAACGA GAGAATTCGA
AATATACTAA GAGTACTTGT GAAGATGCCT TCTTTCAAAG GATACAATTA TTCCAATAAT
CCGGATCTTG AGAAGAACGC AAAGATATCT TACGAAGCAG GTTGCGAAGG TGTCGTATTA
CTCAAGAACA ACGAAGTATT ACCGATATCG AAAGATACAA CAATTGCACT CTTTGGCACT
GGTCAAATCG AAACTATAAG AGGTGGAACG GGAAGTGGTG AAACACATCC GATGTACACT
ATCAATTTCC TCGATGGAGT TGTTGAAAGA GGTCTTAATT TCGATAAAGA ACTTGCGCAA
TTTTATAGAG CAAAAATAGA AGAGTTGCGA AACGGCGAGT ACAGAATAAC ACGTGGACAG
TGGAACGAAG AAATCAAACC GAAATTGCCA GAAAATCTCT TTATTGTTTC TCAATTGGAA
GATATAGCCA AGCGAAACGA TGTTGCAATA ATCTTCATAA CGAGGATATC AGGTGAAGGA
TACGATAGAA GAGCAGAAAA AGGAGATTAC TACTTAACCG ACGATGAATA CGAATTGATT
AAAAACGTAT CTGAGACATT CCATAAATAT GGTAAAAAAT CACTTGTTGT ACTCAACATC
GGTTCTCCTA TAGAAGTTGA GAGTTGGAAA GAGTTAACTG ACGGAATATT ACTGGTTTGG
CAACCTGGTC AAGAAGCTGG GAGAATATTT GCCGATGTAA TTTCAGGAAA GGTTAATCCA
TCAGGTAAAT TAGCAACAAC ATTCCCGAAG GATTACAAGG ATGTACCGTC AAGGTCGTTC
CCTGGAGAGC CAAAGGAAAA TCCTACAAGC GTTACATACG ACGAAGGAAT ATACGTTGGA
TACAGATATT ACGATACATT TAGAGTCGAG CCAAGTTTCG AATTTGGTTT CGGACTTTCG
TACACCAAGT TTGAATACAG TAATTTGAAC CTGTACAAAG ATGGTTCTTC GATAGTTGTT
TGTTTCGATG TCAAAAACGT TGGAAACGTC CCAGGAAAAG AGATAACACA ACTTTACGTT
CGAGCACCAA GGGTGAAAAT AGATAAACCG TACCAAGAGC TCAAGGGCTT TTTTAAAACA
GACACGCTAG CTCCGGGAGA AATGCAAAAG GTGAAGATAA CAGTGCAAAT CAGTGACCTT
GCTTCTTTCG ATGGTGAAAA ATGGGTTGTT GAAGAAGGTA TTTATGAGTT TAGAGTTGGT
GCATCATCGA GAGACATACG TTTGAAGGGT ACTTTGAATT TGTAA
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| Protein sequence | MDMLDIEKVI SQMTLEEKIH FVVGVGVLGI EDNPKARVSG AAGETFEIPR LGIPRTVYAD
GPAGLRIDPE RESDERKYHA TAFPVETMLA STWNKNILKK VGEAMGEEVR EYGVDVLLAP
AINIHRNPLC GRNFEYYSED PLLTGELAAS FVEGVQSQGV GACLKHFVVN EQETNRMTVD
TIVSERALRE IYLKPFEIAI KKSKPWTVMS SYNKLNGYYT SQNSWLLTKV LRYEWQFDGF
VMTDWFAGDD GAKQMAAGND LIMPGKSHQV LKHRRNEIDD IRKAIENGEL TEEVLNERIR
NILRVLVKMP SFKGYNYSNN PDLEKNAKIS YEAGCEGVVL LKNNEVLPIS KDTTIALFGT
GQIETIRGGT GSGETHPMYT INFLDGVVER GLNFDKELAQ FYRAKIEELR NGEYRITRGQ
WNEEIKPKLP ENLFIVSQLE DIAKRNDVAI IFITRISGEG YDRRAEKGDY YLTDDEYELI
KNVSETFHKY GKKSLVVLNI GSPIEVESWK ELTDGILLVW QPGQEAGRIF ADVISGKVNP
SGKLATTFPK DYKDVPSRSF PGEPKENPTS VTYDEGIYVG YRYYDTFRVE PSFEFGFGLS
YTKFEYSNLN LYKDGSSIVV CFDVKNVGNV PGKEITQLYV RAPRVKIDKP YQELKGFFKT
DTLAPGEMQK VKITVQISDL ASFDGEKWVV EEGIYEFRVG ASSRDIRLKG TLNL
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