| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1596 |
|---|
| Symbol | |
|---|
| ID | 5453177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1742025 |
|---|
| End bp | 1744304 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640875372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411095 |
|---|
| Protein GI | 154250270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGGAT TTCAAGGTAA ATACAAATTT TTATTCACTA TAATATACTT GCTTGTTGGC
TATCTGTCTT TTTCTCAGGC GATAGGAAAT GAATTCTTAT CGAACAGGTT TACACGACCA
GAGAAGTACG TAGATGTTAA TTCTCCATTC ACATTGGAAG GTTATACGAA GATAGGTGAA
TCAAGTGCTT TGGAATTATG GATCGATTTG AAAACAACAT CGTTGAGGGT TGTCGATAAA
AGAAGTGGAT ACATCTGGGG TGATGTCGTA ACAACGCATG AAGCATTCTC TGAAATGAAT
GATACGTGGA AGGCAATAGC AAAGTCGATA GTTTTAATCG AATACTTCGA TGATCGTGGT
ATTTCAAATG TGATTGGAAG TGCCGATGAA AGTGTTCAAA AAAGCTATAG TAGAGTCAAT
GATGGTATAG ATTTTAAATT CAATTTCAAA AAAGTAGACA TATCTTTCCT GTTGAGCGTA
AGACTGAGTG GAGATAGAAT TGTCTTTCAA TTGAAGAATG GTACCATAAA GGAATCTGGA
AAATACACGT TGGCTTCGGT TATCTTTGCA CCGTTTCTTG GAAGTACAGT TTCAAATGAG
ATAGATGGAT ACGTGTTCGT ACCGGACGGT CCAGGTGCGC TTATCAGATT TTCAAAGCCC
GCTCATTATC TGAATTGGTT TGAAAAGAGG GTGTATGGTA AGGATTACGG TATCGATAAC
TTAGCTTCTG TCAACGACCT TCGTTCAAAA AGGCCAAATG ATTTCTTACG TGAAGAACCG
TCGATACTTA CACCGGTCTT TGGAATTGTT CATGGTGTTA AAAGAAACGC TATATTTGGT
GTCGTGACAT CTGGTAAAGA GTACTCTTCT ATCGTCGCTT ATCCAAGTGG TATATTAAGC
CTTTACAACT GGGTTTCCGC AAAATTTATA TACCGCCAAA AATACCTTCA ACCAACAAGT
CGCAGTGGTG CAGGTATACA AGTCGCTCAG AAAGACATGA ATAAATTCGA TGCGAAACTT
GAAGTATCGT TCCTAGCAGG TAACGATGCG GATTACGTTG GAATGGCAAA GTATTACAGA
GATAATTATC TCAAAAACAT CTTGGTGAAA AAGATCGTCG GTAGCAACGT GCCTGTTGCA
ATCTCTCTAA TCGCTTCCGA TATTGAAAAG AGAGTAATCG GTTATCGTAC TATGCCGATA
ACAACGTTCA AACAGATTGA AAAGATAGTT AGCGAATTGA AAAATTCAGG GATAGGTAAT
TTGAAAGTGA TAATCAATGG ATGGCAAAAA GGTGGAATCC ACGGGAACAA GATAAGTAAG
CTTTCTTTTG AGGATAGCCT GGGTGATATA GACGATTTGA TAAACTTTGT GAAGAATGGA
AAGAAAAATG GTTACGATGT ATACTTATTA GACAATGTGA CGAAAGTTAC CGAAAAGCAG
ATCAATTTGA AAAAAGAAGT CGGGATAAAC TTGTCTCAGT CGGTTATATA CGAAGATAGG
GATAATAGGG AACTCTGGAT TTACAGAAGT TATTATACAA ACATCGTACT TGCAAGCCAG
TACGTTTCTG AGAAACTCAC AAAGCTGAGC GAAAAGGGAA TTTCAAATTT TGCACTTAAC
GAATATGGTT CGAAGTTGTA CGGTGATTTG AAATACGGAC ATGAATTTTT TAGAAGTGAT
GCGTTGAAAC TTGTTGAAAG AACACTTGAA AACATTTCGA AAAAGACAGA TAGCCTATAT
CTTTCAAATC CTAACGATTA CACATGGAAG TACGTTGATG GTATCTTAGA TATTCCAATG
AATTGCAGCC AATACCTCTT TGAAACAGAC ACTGTACCGT TTTTACAGAT CGTTTTGAGT
GGTAGTATAG ATTACTTCGC ACCTTACGTA AATAATAGTT TCTTTTCACG AATAGATATA
CTCAAGATGA TAGAATACGG CGCATTGCCA TCTTTCTTAT TAACATGGGT TGATAACTAT
TTGATAAAGA AGACTCCACT TTGGGATTAT CCATCAACAA AATACGAAGA CTGGAAAGTA
AAAATTACCG AAATTTACAA GGAAGTTAGT GATGCTTTGA AAAATGTTCG CGGATCAAAG
ATAATTGACA GGTTTGTAGT TGAACCGGGA ATCATCGTCG TAAGTTACAA TAATGGAAAA
TCGATCGTTG TTAATTACAC ATCAAAGACT TACATTCTAA ACGATCAGAA AATTAAACCA
CAATCGTGGA TAGTAACTAA TTCAAATTCT ATAAACGTTG GAGTTGGTCA AAATGAGTAA
|
|---|
| Protein sequence | MSGFQGKYKF LFTIIYLLVG YLSFSQAIGN EFLSNRFTRP EKYVDVNSPF TLEGYTKIGE
SSALELWIDL KTTSLRVVDK RSGYIWGDVV TTHEAFSEMN DTWKAIAKSI VLIEYFDDRG
ISNVIGSADE SVQKSYSRVN DGIDFKFNFK KVDISFLLSV RLSGDRIVFQ LKNGTIKESG
KYTLASVIFA PFLGSTVSNE IDGYVFVPDG PGALIRFSKP AHYLNWFEKR VYGKDYGIDN
LASVNDLRSK RPNDFLREEP SILTPVFGIV HGVKRNAIFG VVTSGKEYSS IVAYPSGILS
LYNWVSAKFI YRQKYLQPTS RSGAGIQVAQ KDMNKFDAKL EVSFLAGNDA DYVGMAKYYR
DNYLKNILVK KIVGSNVPVA ISLIASDIEK RVIGYRTMPI TTFKQIEKIV SELKNSGIGN
LKVIINGWQK GGIHGNKISK LSFEDSLGDI DDLINFVKNG KKNGYDVYLL DNVTKVTEKQ
INLKKEVGIN LSQSVIYEDR DNRELWIYRS YYTNIVLASQ YVSEKLTKLS EKGISNFALN
EYGSKLYGDL KYGHEFFRSD ALKLVERTLE NISKKTDSLY LSNPNDYTWK YVDGILDIPM
NCSQYLFETD TVPFLQIVLS GSIDYFAPYV NNSFFSRIDI LKMIEYGALP SFLLTWVDNY
LIKKTPLWDY PSTKYEDWKV KITEIYKEVS DALKNVRGSK IIDRFVVEPG IIVVSYNNGK
SIVVNYTSKT YILNDQKIKP QSWIVTNSNS INVGVGQNE
|
|---|
| |