| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1595 |
|---|
| Symbol | |
|---|
| ID | 5451826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1740422 |
|---|
| End bp | 1742044 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640875371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411094 |
|---|
| Protein GI | 154250269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGAA TAGGTAGACC TACGAATCCA CTCTTCGGTG AGACAGCTAA TTACAAACCA
AAGAAATTAG TCGTAGATAA AAGAGGCAAT TTGTACATCG TTAGCGAAGG TACTTTTGAA
GGAATTATAC AACTTGATAA AGATGGACAG TTTCTTGGAT ACTTCGGTAG TAATACCGTT
GGTTTAACAT TTTTAGATAA ATTCATAGAT TTATTTTACA CGAAAGAGCA AAAGGCAAAG
TTGTTGAATA GAATTCCTAA ACCATATACA AATATCACTA TCGATGACAA AGGTTTGATA
TACACCGTAA CACAGAAGGA ATCTGGTAAT GCAATAAAAA GGCACAACAC TATCGGTATA
AATGTACTGT CAGCTTCTCG TGATAGAAAG ATGATCGATG AAGATAATTT CATCGATATA
GCTGTTGATA AAGATGGGAG AATGTACGCA TTAACGGAAA CCGGTTTGAT TTACGAATAT
GATCAGGAAG GTAACCTTAT CTTTTCGTTC GGTGGACGCG CAATAGCAAC TGAACGAAAT
GGACTCTTTT CCGTAGCTGT AGCTATAACA ACTGATGAAA ATGGGAATTT GTACGTGCTT
GATAGAGAAA GAGGCCTTGT CCACATATTT GTACCAACAG AATATGCGAA TATACTCCAC
AAAGCGTTGA ATTTATATGA AGAAGGTAAG TACTTAGAAA GTAAGAAGTA CTGGGAACAA
GTAATGACCT ATGATGGATA TTCAAAGATC GCACACCATG GACTGGGTAA AGCATACTTT
CAAGAAGGAG ATTACAATAG AGCAGCTTTG CATTTCAAAG AAGCATTTTC ACGTAGAGAT
TACTCCGATG CATTTTGGGA ATTGAGGAAT ATGTTTTTGC AAAATCATAT GGGGTTGATA
CTCTTTGTTT TCTTACTGAT TATCATTCTA TTCGTACTCA TCGACTGGCT ATCAAGAACC
GGGAAACTTA GCGTAAAGGT AAAGGTAAAA TCAAAGCTCA TTTCAGATAT TTTATACATG
AAAAATATTC TAAAACATCC GTTAGATACG TTTTACTATA TCCAAAAGAA AAGGCACGGT
TCTGTGTTAT CAGCTTCGAT TATTTATTTG TTGTTCTTGA TTGTTGTACT ATTCGATTAC
TTCGGCAGGA GTTTTATATT CAATTTGAAC ACAAATGAGA GAAGTGTTGG GTTTGTGATT
TTAACGGCAG CTGCACCAGT TGGATTGTGG GTCATATCTA ATTGGCTTGT GAGCTCCATA
AACGATGGGA AAGGAACGTT AAGGGATATA TACATCTTCA CCGCTTACAC GTTCGCACCA
TATATACTCT TTCAACCGTT AGTCATTTTA AGTACGTATA TACTCACATA CAATGAGACG
TTCTTAATCG ATTTTGCCTC ATTAATTATC ATATCGTGGG TTGGTGTTTT ACTCTTTACT
GGTGTAAAAG AGATCCACGA TTACAACATC AGAAATACGA TAAAGAGTAT TTTACTCACA
CTTGGTTGGA TATTCGTGAT GATTTTAATA TATTCAATAG TATACATGTT GTGGGACCAA
CTAACGGAAA CCGCTTTTGG TATAGTTCAG GAGGTGTTGT ATCGTGTCAG GATTTCAAGG
TAA
|
|---|
| Protein sequence | MKRIGRPTNP LFGETANYKP KKLVVDKRGN LYIVSEGTFE GIIQLDKDGQ FLGYFGSNTV
GLTFLDKFID LFYTKEQKAK LLNRIPKPYT NITIDDKGLI YTVTQKESGN AIKRHNTIGI
NVLSASRDRK MIDEDNFIDI AVDKDGRMYA LTETGLIYEY DQEGNLIFSF GGRAIATERN
GLFSVAVAIT TDENGNLYVL DRERGLVHIF VPTEYANILH KALNLYEEGK YLESKKYWEQ
VMTYDGYSKI AHHGLGKAYF QEGDYNRAAL HFKEAFSRRD YSDAFWELRN MFLQNHMGLI
LFVFLLIIIL FVLIDWLSRT GKLSVKVKVK SKLISDILYM KNILKHPLDT FYYIQKKRHG
SVLSASIIYL LFLIVVLFDY FGRSFIFNLN TNERSVGFVI LTAAAPVGLW VISNWLVSSI
NDGKGTLRDI YIFTAYTFAP YILFQPLVIL STYILTYNET FLIDFASLII ISWVGVLLFT
GVKEIHDYNI RNTIKSILLT LGWIFVMILI YSIVYMLWDQ LTETAFGIVQ EVLYRVRISR
|
|---|
| |