Gene Fnod_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1594 
Symbol 
ID5453007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1738818 
End bp1740077 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content34% 
IMG OID640875370 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_001411093 
Protein GI154250268 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA AGTATGTTAA TCCAAAAGTT TCAAGAATTT CTCAAGACAC TCTAATTGTC 
GGTATTGATG TTGCTAAAAG AAATCATTGG GTTAGGATGA CTGATTATCG TGGAATTGAT
TTGATTAGCC CTTTCAAGAT TAATAATACC ATAGATGGTA TTAAAATGTT AGAGGAAAAA
ATAAGAATTA TTAAGCAAAA GGAAGGGTTA AACAACGTAA TCTTAGGCAT GGAACCATCA
GGGCATTATT GGAAGGTTTT AGCTTGGCAA ATGAAATCTA ACGAGCAAGT AAATTATCTT
GTTGGAGTAA ATCCATATCA TGTGAAGAAA AGCAAAGAAT TTGATGATAA CTCACCTAGT
AAAAATGACA AGAAAGATGC AGGATTAATA GCCAAATTAA TCAAAGATGG AAGATATTTC
GATATGCATT TATCAAATGA TGTGTATAGT GAGTTAAAAG TATTAACCAC GACAAGGGAA
CAATTAGTAA GTAAGAGAAA AAATTCAAAA AATATTGTAA TAGCTATAAT AGACGAATAC
TTTCCTGAGT ATGAGAAGAT ATACAAAAAC ATATTTTCGG AAGGTTCGAT GAAATTATTA
AAGACCTATC CATTTCCGGA AGAGATATTA AGAGTTGGAG TAGAAGAAAT AGAAAGTGTA
TTGAAAGAAT CGACAAAGGG GAAAGACTGG AAAAGTAGGG CGCGGAAGAT ATACGAAGCA
GCGAGAGAAT CGGTAGGAGT AAGAGCAGGG CAAAAAAGTG CGAAAATGAA ATTAAGGATG
CTATTGGAAG AAATAGAGCT ATTAACAAGA CAAATTCAAG AGCTAGAAGA AGAGATGAAA
AAAATGATAG AAGAAACAGA AGAAGGGGAA TATATAGAAA GTGTGCCAGG GATAGGAACG
GTAATGACAG CCACGATATT AGGAGAGACA GGAGGGTTAA GCAGGTTTAA AAGCTGGAAA
CAAATAAGGA AATTAGCTGG ATTGAACCTG TACGAAGAAA GTTCTGGAGA ACACAAAGGA
AAAACGCGGA TAACAAAAAG AGGGCGGCCG TTACTGAGGA AAATAATATA CTTGATGGCA
AAAACGGTGA TAAGACATAA CCGTGAAATA ATGGAAAAAT ATTTAAAACT GAGGAAAAGA
GAAAAAAATC CATTAAAAGA GACACAAGCA TTGATAGCAA TAGGATTGAA AATGATAAGG
ATAATATTCA AGTTAGTGAA AAGCAAGACA AGATATGAAC CGGAGAGAGT ATATGTATAG
 
Protein sequence
MEQKYVNPKV SRISQDTLIV GIDVAKRNHW VRMTDYRGID LISPFKINNT IDGIKMLEEK 
IRIIKQKEGL NNVILGMEPS GHYWKVLAWQ MKSNEQVNYL VGVNPYHVKK SKEFDDNSPS
KNDKKDAGLI AKLIKDGRYF DMHLSNDVYS ELKVLTTTRE QLVSKRKNSK NIVIAIIDEY
FPEYEKIYKN IFSEGSMKLL KTYPFPEEIL RVGVEEIESV LKESTKGKDW KSRARKIYEA
ARESVGVRAG QKSAKMKLRM LLEEIELLTR QIQELEEEMK KMIEETEEGE YIESVPGIGT
VMTATILGET GGLSRFKSWK QIRKLAGLNL YEESSGEHKG KTRITKRGRP LLRKIIYLMA
KTVIRHNREI MEKYLKLRKR EKNPLKETQA LIAIGLKMIR IIFKLVKSKT RYEPERVYV