Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1574 |
Symbol | |
ID | 5451768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1715149 |
End bp | 1716087 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640875349 |
Product | ISCpe7, transposase |
Protein accession | YP_001411074 |
Protein GI | 154250249 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATA TCCAACTCAA ATGCCCTCAT TGTGGCTCTT CTAACTTCAT CAAAAACGGT CATGATAAGT TCAAAAACCA AATCTTCTTT TGCAAAGACT GCAAGCGTTA CTTTAAACTT TCTTTCACCA AAAAACACAA ACTCTTCTCT TTCCCTTACC CTCGTTGTGT TCATTGTAAC CATGTCATGG AAATTTACAA AATCCGCCGT TATTTCGTTC GTTTCAGATG CAGAAAGTGC AACTTCAAAA CTTCTGTTCC ACTTTCTCTT CCTCAGCCTG TGCCTTTCAA CTTTCATCCT TTCAAATTCT TCCGTTTCCC TATCTATATC GTTCTCAAAG CTTTCATCTT GTACTTCAAA TACAACCTTT CTCTTCGTGC TATTAAAGCT TGCTTGAATA TCAATGTCTC TCATGTTGCT ATTTACAAAT GGATTATCAA GTTATCTTCT GTTATTTCGC TTTTTGAGTT TGAGAATGTA TTTAAAGTTC ACGGTGATGA AACAGTTATT GTATTTCGAG ACAAAAAGTA CTATGTGTGG CTATTAGTTG AGCATGGTAC GAATTTAATA GTAGCTTGGC ATGTATCAAG ATATCGTGAT ATGTCACAAG TTAAGATATT GTTAGATAAA TACTTTAGTC AAAGAAAACA AAACACACAA ATAGAGTTAA TAACCGATGG ACTAAAAGCG TACGAGATAG CAGTAAAACT AAATTTTGAT AATGTTGAGC ACAGAGAAGT AAGACTAGGT AAAAACAACG AATGTGAATC GAAATTTTCG TTATTTAAGA TGTTTGTTAG AGCGAAAAGG AGCTTCAAGA AATTTAGCAA CATACGGTAC TATGTAAATG GTTTTTGTGT AGTAAGGAAC CTATGCAAGT TATATGAGAA CGAAAATGAG ATGATTACAG CTTTAGCTTC CATCATCACT ACTAGTTAA
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Protein sequence | MTNIQLKCPH CGSSNFIKNG HDKFKNQIFF CKDCKRYFKL SFTKKHKLFS FPYPRCVHCN HVMEIYKIRR YFVRFRCRKC NFKTSVPLSL PQPVPFNFHP FKFFRFPIYI VLKAFILYFK YNLSLRAIKA CLNINVSHVA IYKWIIKLSS VISLFEFENV FKVHGDETVI VFRDKKYYVW LLVEHGTNLI VAWHVSRYRD MSQVKILLDK YFSQRKQNTQ IELITDGLKA YEIAVKLNFD NVEHREVRLG KNNECESKFS LFKMFVRAKR SFKKFSNIRY YVNGFCVVRN LCKLYENENE MITALASIIT TS
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