| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1561 |
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| Symbol | |
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| ID | 5451765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1699723 |
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| End bp | 1701321 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875336 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001411061 |
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| Protein GI | 154250236 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.180791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCGTG CTTTTAAGAA GAATAAGTTG GCTATGTTTG GAATGTGGGT ACTTATAGTA
ATATACATTG CAATGATTTT TGCAGATTTT CTCGCACCGT ACAATCCTTT CCAACAAAAT
TTGAACCACT CTTTGAAAAA GCCAACAACA GTGCTTTCAA AATACGAAGT TGCAGATTTA
AAAACGAAGA TGGCGCCTTA CGTTCTGCCA GAAATTAGTT ACATCGATAG TTTAGATTTT
ACACAGAATT TTAAATCTAT GCTCTTCCCA AGTAGAATTA AGGTAAAATA CAGTGATGGA
AGAGAATTAG CTATAATAGA CAAAAACGTC GTTGAGGTTA AAGATGACGG TACAATTGTC
CCAAAATACT TACCAAAGGG TAGGAAATTG GACGAACAAT TTGTACTCGC GAATTCAATA
AAGCTTGTTG TAAGAACTAT AAAATACGCG AAAATAGATG GTGAATGGAA ACAGTATTCA
GACGAAACAG AAGATATTGA AAAACTCGTA TTTGGTGTTG ATAATTCGCT TATTGAAAAA
GGTAAAAACA TTAGAGAAAC AACCTCAAGA ACTGCAAGAT CAGTTGTTGC ACAAAATGAA
GGTTGGAAGA TAGGATTTTA TGCTGTAGAC GAACAAGAAG CTATGGAAAG ACTCACAGCA
ATAAGAATAG AGCAAGAAGT TATAGGTATA AAATACTACG ATGAAGAATT CAATGAACAT
GAAATTTCAC TTGATGAGGC TAAAATTGTT TCTTACGATT ACAAATACTA TCCAGTTAAA
TTCTTTGTTA AATCTTGGGG TCCAGACAGA ACTGACCCAG AACGTGTAGG TTATCTATTC
TGGATAATCC CACTTCACTA TCATCTTTTC GGTGTCGATA ACTACGATAA CAACGAGTAT
GTTTCTCTCA ACATCTTTGG TTCGGATAGG TACGGTAGAG ATGTCTGGAG TAGAATTATA
TTTGCATCAC GCGTATCGCT AACAATAGGT TTCATCGGTT TGTTTGTTAC ACTTGTATTG
TCACTCTTCT TCGGGGCGCT CGCAGGTTTC TACGGCGGAC TTGTAGATGA AATAATCATG
AGATTTTGTG AAATTTTAAT GGCTATTCCT GGTTTTTATC TGCTTCTTAT GTTACGCGCG
TTGTTACCAA TTGATTTACC AAGCTCGCAA ATATACATGT TGTTGATATT CATACTTGCA
TTCTTGGGTT GGCCTGGAAG AGCAAGGATT ATCAGGGGTC AAATACTGGC AGAAAGACAA
AGGGAATATG TAGAAGCAGC TATCGCGCTT GGCTTCCCAG ATATGCGCAT CATGTGGAGA
CATATAATTC CAAACCTTGC AACGTATATA ATCGTAAGTT CCACACTCTC TATACCTGGA
TATATCCTTG GTGAGGCAGG TCTTTCATAC CTCGGACTTG GTATAAGAGA ACCTTCTGCT
TCATGGGGTA ATATGCTTAC AGCTGCTCAA GATGTATACA TACTAGAAAA AGCCCCGTGG
CTACTTATTC CAGGTGCATT CATATTCATA GTGGTTCTTG CATTTAACTT CGTTGGTGAC
GGTTTAAGAG ACGCTTTTGA CCCAAGGGCA TTAGGATAA
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| Protein sequence | MWRAFKKNKL AMFGMWVLIV IYIAMIFADF LAPYNPFQQN LNHSLKKPTT VLSKYEVADL
KTKMAPYVLP EISYIDSLDF TQNFKSMLFP SRIKVKYSDG RELAIIDKNV VEVKDDGTIV
PKYLPKGRKL DEQFVLANSI KLVVRTIKYA KIDGEWKQYS DETEDIEKLV FGVDNSLIEK
GKNIRETTSR TARSVVAQNE GWKIGFYAVD EQEAMERLTA IRIEQEVIGI KYYDEEFNEH
EISLDEAKIV SYDYKYYPVK FFVKSWGPDR TDPERVGYLF WIIPLHYHLF GVDNYDNNEY
VSLNIFGSDR YGRDVWSRII FASRVSLTIG FIGLFVTLVL SLFFGALAGF YGGLVDEIIM
RFCEILMAIP GFYLLLMLRA LLPIDLPSSQ IYMLLIFILA FLGWPGRARI IRGQILAERQ
REYVEAAIAL GFPDMRIMWR HIIPNLATYI IVSSTLSIPG YILGEAGLSY LGLGIREPSA
SWGNMLTAAQ DVYILEKAPW LLIPGAFIFI VVLAFNFVGD GLRDAFDPRA LG
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