Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1558 |
Symbol | |
ID | 5452627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1696151 |
End bp | 1697554 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640875333 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001411058 |
Protein GI | 154250233 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000340299 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTTC CGAAAGATTT TTTATTTGGT GTTTCGATGT CTGGGTTTCA GTTTGAGATG GGAAATCCTC AAGATGCAGA AGAGGTTGAT CTAAATACAG ATTGGTATGT ATGGGTTAGG GATATTGGAA ATATTGTAAA TGGAGTCGTA AGTGGGGACT TGCCTGAAAA TGGTTCATGG TACTGGAAGC AGTACGGCAA AGTCCACCAA TTAGCTGCCG ATTTTGGGAT GGATGTAATA CGAATTGGAA CCGAATGGTC TAGGATTTTC CCAGTTAGTA CGCAAAGTGT TGAGTACGGC TCACCGGATA TGCTCGAAAA ATTGGATAAA TTAGCAAACC AAAAAGCGGT AAGTCATTAC AGGAAAATAA TGGAGGATAT AAAAGCAAAG GGGTTAAAAT TGTTCGTTAA CCTTTACCAC TTTACTTTAC CTATTTGGTT GCACGACCCT ATAGCTGTTC ACAAAGGTGA GAAGACAGAT AAAATTGGTT GGATTTCTGA TGCTACACCT ATTGAGTTTG CGAAGTATGC AGAGTACATG GCGTGGAAAT TTGCCGATAT AGTTGATATG TGGGCTTCTA TGAACGAACC ACACGTTGTA AGTCAGCTTG GATATTTTGC AATAAATGCG GGATTTCCAC CAAGTTATTT TAATCCTTCA TGGTATATCA AAAGTTTAGA AAACGAAGCG AAAGCACATA ACTTATCTTA TGATGCTATA AAAAAGTATA CAAATAATCC TGTTGGAGTT ATATACTCTT TTACATGGTA CGATACTGTT AATAAAGATG ACAAGGAATC TTTTGAAAAT GCTATGGATC TCACAAATTG GCGATTTATA GATATGGTAA AAGATAAAAC TGATTACATA GGTGTAAATT ATTACACAAG AGCGGTTATC GATAGACTTC CCACCACTAT TGACTTTGGC GAATTTAAAA TGAATTGGTA TACTTTGAGA GGTTACGGTT ATTCTTGCGA AGAAGGAGGA TTCTCACTCT CCGGAAGGCC GGCAAGCGAA TTTGGATGGG AAATATACCC TGAAGGGCTG TACAATATTT TGATACATGT TTATAATAGA TACAAAAAAG ATATTTATGT TACGGAGAAC GGTATAGCTG ATTCGAAGGA TAAATACAGA AGTCTTTTTA TCATATCGCA TCTTTATGCT ATAGAAAAAG CATTAAACGA AGGAATACCA ATAAAAGGTT ATTTGCACTG GTCGATTATA GACAATTTCG AATGGGCGAA GGGCTACAGT AAAAGATTTG GACTTGCTTA CACAGATTTG TCAACCAAAA AATATATACC TAGACCTTCT ATGTACATTT TTAGAGAGAT AATAAAGGAT AAATCAATCG ACAAATTCAA AGGTTACGAT CCATATAACT TGATGAAATT CTGA
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Protein sequence | MMFPKDFLFG VSMSGFQFEM GNPQDAEEVD LNTDWYVWVR DIGNIVNGVV SGDLPENGSW YWKQYGKVHQ LAADFGMDVI RIGTEWSRIF PVSTQSVEYG SPDMLEKLDK LANQKAVSHY RKIMEDIKAK GLKLFVNLYH FTLPIWLHDP IAVHKGEKTD KIGWISDATP IEFAKYAEYM AWKFADIVDM WASMNEPHVV SQLGYFAINA GFPPSYFNPS WYIKSLENEA KAHNLSYDAI KKYTNNPVGV IYSFTWYDTV NKDDKESFEN AMDLTNWRFI DMVKDKTDYI GVNYYTRAVI DRLPTTIDFG EFKMNWYTLR GYGYSCEEGG FSLSGRPASE FGWEIYPEGL YNILIHVYNR YKKDIYVTEN GIADSKDKYR SLFIISHLYA IEKALNEGIP IKGYLHWSII DNFEWAKGYS KRFGLAYTDL STKKYIPRPS MYIFREIIKD KSIDKFKGYD PYNLMKF
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