| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1469 |
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| Symbol | |
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| ID | 5452220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1593206 |
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| End bp | 1594318 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640875242 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001410969 |
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| Protein GI | 154250144 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000103418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAGGT TTTTGTTGAT TTTATTTCTG ATTTTTAGTA TTTTTGTTTT CTCAGAAATA
AAGATTGGTG TACTTCTTCC ACTCACCGGT GGAATTTCTG CTTTTGGTGA TTGGACAAAA
AAAGGTATAG AACTTGCGTA CAGCCAAAAA TCAACAGTTC TTGGTGAGAA GATAACACTT
GTTTACGCTG ATACCAGAAG TGAAAAAACA GAAGCGGCAA ACGCTATGGC AAGACTTATA
GATAAAGAAA AAGTGGTAGC TGTAATTGGT GAGATTGCAA GTAGTAATTC AATTGCGGCA
GCAGAAATTG CAGAAGCGAG AAAAGTACCA CAAGTTGCAG TCACTTCAAC AAATCCTTTG
GTAACACAAG GAAAGAAATT TGTCTCACGT GTGTGTTTTA TTGATCCGCT ACAAGGTACC
GCACTTGCAG AATTTGCCGG TAAAACTTTA AAAGCGAAGA AAGTGGCGAT ATTCGTTGAT
ATCGAACAAG ATTACAGTGT GGGTTTGACA AATTACTTTA AAGAAAGGTT TGAAAAGAAA
TACAAAGGGC AAATTTTGGA AGTTCGTTAC AAATCTGGTG ACCAGGAGTT TAGCGCACAA
CTTGCTCAAG CACTTGCATT TAATAGTGAT GTGATAATGT TCACTGGATA TTACAACGAA
ATAGCTCTCG CTGCACAGCA GGCTAGAGCC ATGGGATATA AAGGCTACTT TATTGCTGGA
GATGGTGCAG ATGCTCCAGA GCTTATAAAA ATAGGCGGAC AAGCAGTTGA AGGACTTTAT
TTCACGACAC ATTATGTCCC AGAAGCAGCT AAGACAAAGA TTGCAAAAGA CTTTGTAGAT
GCCTTTAAGA AGAAATTTAA TACCCTTCCT GCAATGAACG CGGCTCTCGG TTATGATGCA
TATATGCTTA TTGTAAATGC TATTGAAAGG GCAAAGTCAA AAGACCCAGT TAAAATCAAT
GAAGCAATTA GATCCACAAA AGGTTTCCAG GGTGTTAGTG GGAATATAGA TATAGATGAA
AACGGTAATG CAGTTAAAGA TGTAATTATC GTACAAGTTA AAGGTGGAAA ATTTACATAT
GTAACAACCA TAGGTCCCGA AGATTTGAAA TAA
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| Protein sequence | MKRFLLILFL IFSIFVFSEI KIGVLLPLTG GISAFGDWTK KGIELAYSQK STVLGEKITL
VYADTRSEKT EAANAMARLI DKEKVVAVIG EIASSNSIAA AEIAEARKVP QVAVTSTNPL
VTQGKKFVSR VCFIDPLQGT ALAEFAGKTL KAKKVAIFVD IEQDYSVGLT NYFKERFEKK
YKGQILEVRY KSGDQEFSAQ LAQALAFNSD VIMFTGYYNE IALAAQQARA MGYKGYFIAG
DGADAPELIK IGGQAVEGLY FTTHYVPEAA KTKIAKDFVD AFKKKFNTLP AMNAALGYDA
YMLIVNAIER AKSKDPVKIN EAIRSTKGFQ GVSGNIDIDE NGNAVKDVII VQVKGGKFTY
VTTIGPEDLK
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