Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1459 |
Symbol | |
ID | 5453279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1583054 |
End bp | 1583818 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640875232 |
Product | hypothetical protein |
Protein accession | YP_001410959 |
Protein GI | 154250134 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000468004 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATCGTTAAT TGCTCTAATT TTACTATTTT TTCTAAACTC ATCCCTCAGA GCAATTACAT TTCCACAGCC AACACCATTG AAATATGTTA ACGATTACGT TGGAATAATT AGCGAAGATT ATGTAAAAAA CATAGTCTCT ATAGGTAAAG AACTTGAAGA AAAAACGGGT GCGCAACTAA CAGCTGTCAT AGTTGATACC ATAGGAGACA CAACAATTGA AGAATACGCT GTTGAGTTAC TCAGAAAATG GGGAATAGGT CAAAAAGGCA AAGACAACGG TGTGCTATTA CTTGTTGCTG TAAAAGACAG AGTAATGAGG ATTGAAGTTG GATACGGGCT TGAAGGTGCG ATACCAGATG GCAAGGCAGG ACGAATCAGA GATGAATACA TAATACCATA TTTCAAACAA GAAGACTATT CCAAAGGTGT ATACTATGGC TATTTAGCCC TTGCGAAAGA GATAGCAAAG GAATACAATG TAGAATTGAC AATGGATATA GATAGTGAAT TACCTCAACA AGATGAAACT GAAACAATTC AAAAATATTT ACCGATAATT GTCTTTGTAA TCATCGTAAT ACTGATAACT CTATCAAAAA GAACAAGGAT AAGTGGTATG GGACCAAGGG GGCCGTTTGG ACCAGGTGGA TTTGGTGGAT TCGGAGGTTC CGGTGGCGGA AGAAGTTCTG GCGGTGGATT TGGTAGTTTC GGTGGTGGGC GAAGCGGTGG AGGTGGTGCA AGTGGGAAGT GGTGA
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Protein sequence | MKKISLIALI LLFFLNSSLR AITFPQPTPL KYVNDYVGII SEDYVKNIVS IGKELEEKTG AQLTAVIVDT IGDTTIEEYA VELLRKWGIG QKGKDNGVLL LVAVKDRVMR IEVGYGLEGA IPDGKAGRIR DEYIIPYFKQ EDYSKGVYYG YLALAKEIAK EYNVELTMDI DSELPQQDET ETIQKYLPII VFVIIVILIT LSKRTRISGM GPRGPFGPGG FGGFGGSGGG RSSGGGFGSF GGGRSGGGGA SGKW
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