Gene Fnod_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1443 
Symbol 
ID5452239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1565211 
End bp1565657 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content28% 
IMG OID640875215 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001410943 
Protein GI154250118 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA ACATAGAGTT TGCTAAAGAA GTTGTAAAAA ACATTATGGA AATCACCACC 
AATTTCGTAA ACTTCATACC ACAGATTTCT GAATTTGAAG AAATGAGTAC AACTGAACTT
TACATATTTT TGTTTATAGC AACAAACGAC AAAACTTTTA ATAACGAAAT TTCCAAAAAA
CTTGGAGTAT CAAAAAGTAC AGTAAGTATG TCTTTGAAAA AATTAATAGA AAACAAACTT
ATAGAAACTG TTGAAGACGA AAAAGACAGA AGATATACAA TGATTCACTT ATCGGAAAAT
GGACAGAAAC TATTTAACAA GTTCTTGTCC TCATTTCAAA CTATATTAGA TGGCGTCTAT
AAATCTTTCG GAAACGAAAA AATTCAAAAA CTAAACGAGT GTTTTGATAG TATACTCGAA
TTTTCAAGAG TAATTTCTAA AAAATAA
 
Protein sequence
MELNIEFAKE VVKNIMEITT NFVNFIPQIS EFEEMSTTEL YIFLFIATND KTFNNEISKK 
LGVSKSTVSM SLKKLIENKL IETVEDEKDR RYTMIHLSEN GQKLFNKFLS SFQTILDGVY
KSFGNEKIQK LNECFDSILE FSRVISKK