| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1442 |
|---|
| Symbol | |
|---|
| ID | 5452257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1564220 |
|---|
| End bp | 1565188 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640875214 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001410942 |
|---|
| Protein GI | 154250117 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTAG TTACTGGAGG TACAGGACAC CTTGGCAATG TTTTAATTAA AAAATTAATC
ACCGAAGGTG AAAAAGTAAG GGTTTTAGTC CAACCTGGAG ATTCTCTCTA TTCATTACAA
TACTTACCTA TCGAGGTTGT TTATGGTGAT ATTCGCGGTG ATATTAAAAA AGCTTTTAGT
GGTGTCGATG CTGTCTTTCA CCTTGCGTCG GTTATATCAA TCACAAATTC CAACAAAAAG
CTAATATATT CTGTAAACGT TGATGGCACA AATAACATTA TAAATTTAGC TAAAGAGCAC
AGAATTCCAC TCATATACGT TAGTAGCGTA CATGCGTTCT CCGAAGTCAA ACCCGGATCC
GTAATAGATG AAAAGACTCC AATTGACGAA AATAACGTAG TCGGGGATTA TGCAAAGTCA
AAAGCAATAG CCACCAAAAA GGTTATGGAA GCATTTAAAG ATGGTTTAAG TGGTTTTATT
GTATTTCCAA CAGGGATATT TGGGCCATAT GATTATAAAT TTTCTTATTT CTCAAGAGTT
TTGGAAAAAT ATAGACTTGG AAAGCTAAAG ATAACAGTAA ATGGTAGATT CGATTTTGTT
GATGTTAGAG ATGTCGCAAA TAGCATCGTT GCTTTATATA ATCTTTTAAA AGAAAGACAT
TATATCGTGA ACCATCAAGG CTTCATAGTC TCTGGAAACA AAATTCACTT CGAAAAATTA
CCATTGTTAT GTGGTCTGAG AAAATACAAG ATACTAAAAA ATTCATCCGC ACGTCTAATG
AGTTATTTAA CACTATTATT TAACTCGCTT TTTAAAATCC CCGTTGAATT CGTTCCATAT
GCATTACACA CACTTGAGCT CGATTATACC TATTCTCACG AAAAGCTTTC AAGCACAATA
GCTTATCATC CAAGAAAAGT GGAAGAGACC ATTCAAGATT TTTTCAAATG GCTTGACGAA
ATACATTGA
|
|---|
| Protein sequence | MVLVTGGTGH LGNVLIKKLI TEGEKVRVLV QPGDSLYSLQ YLPIEVVYGD IRGDIKKAFS
GVDAVFHLAS VISITNSNKK LIYSVNVDGT NNIINLAKEH RIPLIYVSSV HAFSEVKPGS
VIDEKTPIDE NNVVGDYAKS KAIATKKVME AFKDGLSGFI VFPTGIFGPY DYKFSYFSRV
LEKYRLGKLK ITVNGRFDFV DVRDVANSIV ALYNLLKERH YIVNHQGFIV SGNKIHFEKL
PLLCGLRKYK ILKNSSARLM SYLTLLFNSL FKIPVEFVPY ALHTLELDYT YSHEKLSSTI
AYHPRKVEET IQDFFKWLDE IH
|
|---|
| |