| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1424 |
|---|
| Symbol | |
|---|
| ID | 5452605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1540780 |
|---|
| End bp | 1542060 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640875197 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410925 |
|---|
| Protein GI | 154250100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTA AAAGATTAAA CATAGAAACA TTTAGAAAAT CTTTTGTTTA TAAGATTCTA
ATATTAACAA TATTCACATT CTTTGCATCC TCGGTGGTGT ACGCCGCCGA GGCTTCTCAA
TCGATACCTT CAAAATTGGG AATTAAAAAA ATAGAGTTAA ATAAGACTAT AAAAGTCGAC
GGAAAAAATT ATCCGTACAC CTTTTTAGAT GGAATGCTCC TTAAAGATGG TGAAAGAAAA
ATTACAATAG ACAACAAGAC ATACACCGTG GAAGTTAAGA CACAACCAGA CAAAGAACCT
ATTGAAGTTA CCCAATCTTT GTATGCTTAT ACATTCACCA AAGCGGCTTT AGTAATTAAT
CCAACCAACC GTTCGTTAGG AAATCCGGTA AAGAGCACGG AAGTAACCTT GTCTGAAAAT
CCTCAAATCG CGGTATTTGA AGATGAATTC GGTAATATCT CCGATGTTAT ATTCATCCCT
CCACTACTTG AAAAACTAGA CATACTAGAT TCCCAAGTCC CAATAACAAA CATATCTGGG
AAAAAATTCT TACTCTCTTC AAAATCACCT TACAGACTCC TGAGCAAAGT TATTCTAAAC
GAACAAAGTG GGCTCATACT TGAGGAAGGC GTGGTTATAA TGAACGCGCT CAATTCTGAG
CTAAACATCA AAGGTTCATT CATATCAACA GGTCCAATAA CTATCCTCGA AAGCGGAAGA
TTAAGCGTAA CCCAAAGTGG CATACTTTAC TTAAATGGGA ATGCTTACAC TACAAACATA
AACTCCGATA TAGGGGCTTT AATCTTTCTT GATAACGCGA AGGCCAACAA TGCCAATTTA
GTACTACCAA ATTTTGTCGT CATAAGAAAT TCTGAGCTTC AAAATGTAAC AATAAATGGC
GCTTACGCTG TGTATATAAT AAACTCAAAG ATAGAAAACC TAAACATCCA AAATTGCGGA
AAAGTATATA TAAACAACTC TGTAGTAAAC ACCTTCGTGA CTTCTCTACT TTCCAAAGTA
ATCATGTACG ACTCTCAAAT AGACAACTCT GAAATCTCGG ATCTTTCTGA GCTGAACATA
GTTAATTCGA AAATTTCATC GCTGAAAATT CTAAAAGGTG GATTAGTTAA ATCAAAAAAT
TCTGAATTAA ACCAAATTGA TATTGATGAT TATTCAATAA TCTACTTATT CAATACAAGT
GCAAACGCGC TCAACGTAGG CAATGGAAAA TATTACAACC TTGAAAGTAA GATAAAAACA
ATAAACAAAA TTAAAAAATG A
|
|---|
| Protein sequence | MTIKRLNIET FRKSFVYKIL ILTIFTFFAS SVVYAAEASQ SIPSKLGIKK IELNKTIKVD
GKNYPYTFLD GMLLKDGERK ITIDNKTYTV EVKTQPDKEP IEVTQSLYAY TFTKAALVIN
PTNRSLGNPV KSTEVTLSEN PQIAVFEDEF GNISDVIFIP PLLEKLDILD SQVPITNISG
KKFLLSSKSP YRLLSKVILN EQSGLILEEG VVIMNALNSE LNIKGSFIST GPITILESGR
LSVTQSGILY LNGNAYTTNI NSDIGALIFL DNAKANNANL VLPNFVVIRN SELQNVTING
AYAVYIINSK IENLNIQNCG KVYINNSVVN TFVTSLLSKV IMYDSQIDNS EISDLSELNI
VNSKISSLKI LKGGLVKSKN SELNQIDIDD YSIIYLFNTS ANALNVGNGK YYNLESKIKT
INKIKK
|
|---|
| |