| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1404 |
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| Symbol | |
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| ID | 5452934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1512443 |
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| End bp | 1517251 |
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| Gene Length | 4809 bp |
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| Protein Length | 1602 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875179 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001410907 |
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| Protein GI | 154250082 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGGC TTGATCCAAT TGAAACAACA CGGACAGTTG TAAATCGTTA CATTGATTAT
TTAACAACTA CGTTTTCATT TAACGACCCT GAACTTAGGG AACAACTTAG AAGCGAACTA
ATAAATAAGA AAAAATTTGT TAAAGGCCCC ATCTTAGAGG CAACACCACC ATTTGAAACA
GGTAAGAAGC TAATAGAACT AATCGAAGAA GGTATCCTTT CACGAGAGTT TCTTAAACTT
TCATCTAATG CCTTGCCTCT TGACAGACAT CTGTACATTC ATCAAGAAGA AGCAATAAGA
AAAATTGTAG TAGATAAGAG AAATGTCATA ATTTCAACAG GCACAGGAAG TGGAAAAACT
GAGTCATTTT TGATACCAAT TCTGAGTTAC CTTATGAGAC AGAAAGAAAT TGGTCGGCTT
ACTCCCGGTG TAAGAGCACT CATCCTGTAT CCTATGAATG CACTAGCTAA CGACCAGCTA
AAGCGCCTAC GTCAAGTCTT GAAGAATTAT CCAGATATAA CCTTTGGTAG CTACACAGGG
GAAACGGAAA GCACTGAATC TAGAGCTATA GAAAAATTCC AAAAAATGAA TCCTAACGAA
AATAGATTAG TGAATGAACT GTTATCCAGG GAAATGATGC AAAAGAAACC TCCTCACATT
CTAATAACAA ACTATGCAAT GCTTGAATAC TTACTCCTAA GACCTGACGA TAATGTATTT
TTTGATGGAA AACACGCTTC TGAATGGAAA TTCATTGTCG TAGATGAAAT TCACATTTAT
TCAGGCTCAA AAGGCATCGA GTTCTCAATG CTGCTTAGAA GATTAAAGGA TCGAGTAACT
AAAGGTCAAA AAGAAAAAAT TCAATGCATA GGAACAAGTG CAACACTTGC AAGTGAAAAC
AACGAAGAAT TCGAAGAAGT AGCAAAGTTC GCTGAACAAC TGTTTGACGA AAAATTTGAG
TGGATTAAAA CAGATCCAAA GAGACAAGAT ATTATCACAG GTAAGAAGAA AAAGCTCAAT
ATTTCTAGTC AACCGTGGGG TGAACCGGAA GAATCCCTCT ATGCGGCTTG GTCAGAAATT
ATTGAAAATG AAAGTAATCA AAATTTAGTT ATTGAAAAAC TAATAATTGA AGGAAAGAAA
CATGGAATTC CTGAGTATGT GATTGAGAAC GTAAGAAACA ACTGTGAAGA CAATTGGCAG
AAGTTTTTGT ATCTAGTCCT CAAAGATGAT AAAAGAATTG TTCAGCTTCA AAACATAATA
GAGGAAAAGC CTGAGTATTT TGAGGACATG GCGAGAAGAA TATTTACATC CGATAACGAT
GAATTCAATT ACAAAAATTT GTCAGCCTTA GTGCATGTTG CAAGCAACGC CAAACTGGAT
GAAAATTCGC AACCACTCCT TCCTGTAAGG TATCATCTGT TTATACGTGC GCTCGAAGGC
GGGTTCATAT CACTATTTCC GAAAATAAAA CTTTACTTAA ATAGGCGAGA GTGGACTGAT
GACAAAGAGT TCCGGTGTTT CGAGATTGCC ACCTGTTCCA AATGTAACTC ACTTTACATA
GTAGGTGAGC TCAATACAAG GGATAACTTG TTGTATCTGA ACCAGCCTGG CAAACGATTT
TTCGAAGACA TGAAGAGTCT AAAATTCTTC CTAGTACCAA CAACATCCCT TGCTCCGGAT
AACGAGGATG AAATGATATT GTTAGACAAT AACGAACAAC AAGAAGATCT CGACAATGAG
TACATTCTTT GTGGAAAATG TGGTGCCATA AGACAGGCGA ACGAAAGTGG AGAATTTTGC
AGTTGTGGAA CTCAATACCA CGTCAAAGTT ATCAAGGCCT CAACTCGTGA AGGAATCATT
CATAAGTGTC CTGCATGCGG CAGCATTAAC CCCAGTTCAT CAATTGTCAG ACGATTGATC
CTTGGAAGTG AGGCTGCAAC AAGTGTTTTA GCCACAGCTC TTTACCAACA TACCGGCGAG
AGAGAAAATC CAAAATTAGA GCTGAACTCA GATGATGGAT GGTATGTCCC ATCAGTACCA
AATTCTGCAG AAACTAAAAA GAGAATGTTG ATCTTTTCGG ATAGCCGACA GGATGCTGCG
TTCTTCTCCG TATATTTAGA GAATTCATAC AATCTAATAC TACAAAAACG ACTATTAGCA
ATGACTATTG AACGATTTGC GGATGAGATT ATTAAGAATG AGTGGAGAAT AAATGATCTT
GCGAGGTATC TTAAAAGAAT AATGCAAGAA TCTGGAATCT TTAAAGAATA CAGTCCCCAG
GAATTGGAGG AAATTGCATG GAAGTATGTT CTTAATGAAT TTTTGGAACG TGGCGGAGAA
ACAAGTTTAA CCAGTCTAGG GGTATTAAGT TTTAAGCCGT TGTTATCGAA TAATCAACTT
CCACCAGCTT TACGCAAACA GTTCGTAGAG CTAACTGAAA ACGAAGCAAA TGATCTTCTA
TTCGTATTGC TCGATACCAT ACGAAAATAT GGTGCTGTGA AATTTCCCGA CATTGTAGAT
CGTAATGACG AGTTCTTTGC ACCACTGAAT AAAGATATTT GTTTTAAATA CGTTAAAGGA
AATGAAGAGC GAACGAAAAA AGTGCTAAGT TGGATTCCTT ATGAAAACAA AATCAATTCA
AGGGTAGACT TTTTGATGCG CCTAGCCGCT GTAAAGGGAG AAGAAAAAAC AACGGATGAA
GCCATAAAAT TCCTTTCAGA CATATGGCAT AAGTTCTTAG TTCCACAAAC TAGTTTCCTC
TCAGGAGACC CCAAGAATGG CTATCGCCTT GATTTAAGTT ACTGGAAAAT AGTACCCCTG
GAAGTTGACA AATCCAGCAA GGTCTACAGA TGTACAAAAT GTAACAAGAT ATCCATTTAC
AATGTTCAGG GTGTTTGCCC ATCGTATCGT TGTGATGGGC AACTAGTTGA AATCAATATT
TCTGAAGAAT TGGAAAATAA TCACTATAGA AAACTTTTCT TGACAATACC TCCGATAAGC
ATGAAGGTGA AAGAACACAC CGCACAACTT ACCACAGACA CCGCTGCTGA AATCCAAGCA
AAATTTAACA AAGGAGAAAT AAACATACTG AGCTGTAGCA CAACATTTGA ATTGGGAGTC
GATGTTGGTG AACTTGAGGT CGTATTTTTA CGAAACGTCC CACCCACCCC TTCAAACTAT
GTGCAAAGAG TAGGACGTGC TGGACGAAGA ATATCATCAA CGGCCTTCGC ACTTACATTT
GCACAAGCAC GTTCACACGA TTTTTCACAT TTTTCTGAAC CTTTCAGAAT GGTTGAAGGA
AAAATAAAGC CACCACATTT TGAATTAAGG AACGAGAAAA TAATCAAAAG ACACATTCAC
TCAGTCGTAC TCTCGCTATT TTGGAAGGAG AATCCTTATT ATTACGGCAC AGTTAAAAAC
TTTTTCGAAA AAGATAAACC TATAACGGAG GTATTGAGAG AATTCCTGCA TAACAAACCT
CAAGAATTGA AAGAGAGATT AGAAAGAATA GTTCCAAAAG ACATACAAAT GGAAATAGGT
ATTCAAAACT GGGAGTGGAT TAATGAGTTT ATAGGTAAAG ACGGTGTATT AACAAAAGCC
GAAAGAAGAA TATTAAGTGA CATAGAAGAA CTAAAAACCA TAGAAAGAGA ATACTCCAAC
AATCGTCAAC ACAGAAGAGC AGATGAAGTA AGCAGAATCA TTAACACACT TGAAAATAAG
AACATAATAG ATTATCTCTC GCAGAGTAAC GTGATTCCGA AATATGGCTT TCCAGTAGAC
GTTGTCGAGT TGATTATAGA TCATTACGGC GATGAGGCAA AGGGGCTTGA GCTCACAAGA
GATCTGAAAA TTGCCATATC TGAATACGCA CCCGACAGCG AAGTCATAGC TGGTGGAAAA
CTCTGGACAA GCAGATATAT TAAAAAACTA CCTGACAGAG AACCAATAAC ATATCGATAC
GGTATCTGTG ATAAATGTAA GAGATACTTC AGCGATATAG CAGAAAAACA TGACACATTC
GATACATGCA AATATTGCGG TTCAAAACTG AAACAAAAAG GAATTTTTAT AACCCCAGAA
TTTGGTTTCA TATCAGAAAA ACCAAGGAAA CCTAGTATGA CAAAACCCGA AAGAACTTAC
ACCACGCGTT ATCACTTTGC TCAGGAAGAG AAAATTGACG AACCAATAAC CTTGGAAAAG
AACGGTTTTA TTATACAAAT ATCAGCAGGA AGTGGAAAAC TTGCGGTTAT AAATAACGCC
GGAATGCGCG GTTTTATAGT CTGCAAAAAA TGTGGTTATG CAGAGATATA CAATAATAAG
TATTCTCGAA CTCATAGGAA TCCTTATGGC AAAGAATGCA CAGGTTCTTT CGAAAGATAC
GCATTAGGTT ACGAATTCAA GACCGACATA TGTATTATAA AAATCCCAGA GCTCATCAAT
ACAGACGAAG CCTTTTGGTT ATCAATGTTG TACGGGCTAA TCGAGGGAAC AAGTAAAGCT
TTAGAAATAG AACGCCAAGA CATTGATGGT ACGTTATATT ACTATCAAGG TGCTCTAGGG
AGTCCAGCAT TAGTTCTCTT TGACGATTTT CCCGGAGGAG CAGGACATGT CAAAAGAATA
GCTAACGAGG ACAATTTTAC GAAGATACTT TATGAAACCC TAAACATTGT TAAAAACTGC
GAATGCGGTG GTACAGACGG TGATTCAAGC TGTTATGGTT GTCTACGAAA CTACAAAAAC
CAATACTGTC ATGATTCCTT AAAGAGAAAG TATGTTATAA ACTTTCTGTC AGAGTTACTC
GGAGAATAG
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| Protein sequence | MHRLDPIETT RTVVNRYIDY LTTTFSFNDP ELREQLRSEL INKKKFVKGP ILEATPPFET
GKKLIELIEE GILSREFLKL SSNALPLDRH LYIHQEEAIR KIVVDKRNVI ISTGTGSGKT
ESFLIPILSY LMRQKEIGRL TPGVRALILY PMNALANDQL KRLRQVLKNY PDITFGSYTG
ETESTESRAI EKFQKMNPNE NRLVNELLSR EMMQKKPPHI LITNYAMLEY LLLRPDDNVF
FDGKHASEWK FIVVDEIHIY SGSKGIEFSM LLRRLKDRVT KGQKEKIQCI GTSATLASEN
NEEFEEVAKF AEQLFDEKFE WIKTDPKRQD IITGKKKKLN ISSQPWGEPE ESLYAAWSEI
IENESNQNLV IEKLIIEGKK HGIPEYVIEN VRNNCEDNWQ KFLYLVLKDD KRIVQLQNII
EEKPEYFEDM ARRIFTSDND EFNYKNLSAL VHVASNAKLD ENSQPLLPVR YHLFIRALEG
GFISLFPKIK LYLNRREWTD DKEFRCFEIA TCSKCNSLYI VGELNTRDNL LYLNQPGKRF
FEDMKSLKFF LVPTTSLAPD NEDEMILLDN NEQQEDLDNE YILCGKCGAI RQANESGEFC
SCGTQYHVKV IKASTREGII HKCPACGSIN PSSSIVRRLI LGSEAATSVL ATALYQHTGE
RENPKLELNS DDGWYVPSVP NSAETKKRML IFSDSRQDAA FFSVYLENSY NLILQKRLLA
MTIERFADEI IKNEWRINDL ARYLKRIMQE SGIFKEYSPQ ELEEIAWKYV LNEFLERGGE
TSLTSLGVLS FKPLLSNNQL PPALRKQFVE LTENEANDLL FVLLDTIRKY GAVKFPDIVD
RNDEFFAPLN KDICFKYVKG NEERTKKVLS WIPYENKINS RVDFLMRLAA VKGEEKTTDE
AIKFLSDIWH KFLVPQTSFL SGDPKNGYRL DLSYWKIVPL EVDKSSKVYR CTKCNKISIY
NVQGVCPSYR CDGQLVEINI SEELENNHYR KLFLTIPPIS MKVKEHTAQL TTDTAAEIQA
KFNKGEINIL SCSTTFELGV DVGELEVVFL RNVPPTPSNY VQRVGRAGRR ISSTAFALTF
AQARSHDFSH FSEPFRMVEG KIKPPHFELR NEKIIKRHIH SVVLSLFWKE NPYYYGTVKN
FFEKDKPITE VLREFLHNKP QELKERLERI VPKDIQMEIG IQNWEWINEF IGKDGVLTKA
ERRILSDIEE LKTIEREYSN NRQHRRADEV SRIINTLENK NIIDYLSQSN VIPKYGFPVD
VVELIIDHYG DEAKGLELTR DLKIAISEYA PDSEVIAGGK LWTSRYIKKL PDREPITYRY
GICDKCKRYF SDIAEKHDTF DTCKYCGSKL KQKGIFITPE FGFISEKPRK PSMTKPERTY
TTRYHFAQEE KIDEPITLEK NGFIIQISAG SGKLAVINNA GMRGFIVCKK CGYAEIYNNK
YSRTHRNPYG KECTGSFERY ALGYEFKTDI CIIKIPELIN TDEAFWLSML YGLIEGTSKA
LEIERQDIDG TLYYYQGALG SPALVLFDDF PGGAGHVKRI ANEDNFTKIL YETLNIVKNC
ECGGTDGDSS CYGCLRNYKN QYCHDSLKRK YVINFLSELL GE
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