Gene Fnod_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1310 
Symbol 
ID5451857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1416674 
End bp1417825 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content38% 
IMG OID640875086 
Productsodium ion-translocating decarboxylase, beta subunit 
Protein accessionYP_001410814 
Protein GI154249989 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTAGAAC AATTCTTATT GTTTTTTCAG AAAATGGCAT TCTCTCAGAT GACTTTTGGT 
AATATCTTTA TGCTTCTTAT AGCTGGTGTT TTGATTTATG TGGCTGTCAA AAAAGATGCT 
GAACCGCTTT TGCTTATACC AATCGCATTT GGAATAGTTC TTTCGAACAT CCCACCACTT 
GCGACGGGCA TATTAAATCC TCCGCAAACT TTCCCAGATG GGAGATTTAT ACCTGGTGGA 
TTTATGTATT ACATAAAAAA AGGACTAGAT TGGGGTGTTT ACCCACCTCT TATATTTTTA 
GGAATAGGCG CTCTTACTGA CTTTTCTTTC ATGATATCCT ATCCGATAAC CATATTTCTT 
GGTGGTGCTG CTCAAATCGG TATATTTGTG ACATTCATAC TCGCAAGAGC ATTTGGATTT 
ACTTTTAAAC AGGCTGCATC CATTGGTATA ATCGGAGGAG CGGATGGTCC TACATCGATA 
TATGTTGCAA CAAAGTTTGC GCCAGAATTA CTTTCTATAA TAGCTATCGC CGCGTATTCT 
TATATAGCTT TAATTCCTAT TTTACAACCA CCGGTGTCTA AGTTGCTTAC AACGAAAAAA 
GAAAGGTTGA TTCGCATGAA ACCACCAAGA AAGGTTTCTA AAACGGAAAA GATATTGTTT 
TCACTTATAA CAACCCTTGT AACAGCATTA CTCGTTCCTC AATCTTTAAC ACTTGTTGGG 
CCTCTTATGT TTGGTAATCT TCTTAGAGAA GTTGGTAATG TCAAAAGACT TGTTGAAGCG 
GCAAGCAAGT ATATATTAGA CACAACGACA ATACTTCTTT GTTTGTCAGT GGGTGCATCT 
GCAAGAGCTG ATATATTCTT AAAACCTCAA TCTCTTCTGG TCTTTGGAAT GGGAGCTTTT 
GCGTTTGTTT CCGCTCTTGC TTCAGGGATA CTGTTTGCAA AATTAATGAA TTTATTTATG 
AAAGATAAAA TAAACCCATT AATTGGCGCT GCTGGAGTTT CAGCTGTTCC CGATAGTGCA 
AGAGTTGCTC AGAAAATTGC TCAAGAAGAA GATCCAACAA ACTTCATACT TATGCATGCG 
ATGTCTCCAA ACGTAGCCGG AGTTATTGGA TCAGCAGTTG CTGCAGGCGT CTTTTTAGCA 
ATATTTGGAT AG
 
Protein sequence
MLEQFLLFFQ KMAFSQMTFG NIFMLLIAGV LIYVAVKKDA EPLLLIPIAF GIVLSNIPPL 
ATGILNPPQT FPDGRFIPGG FMYYIKKGLD WGVYPPLIFL GIGALTDFSF MISYPITIFL 
GGAAQIGIFV TFILARAFGF TFKQAASIGI IGGADGPTSI YVATKFAPEL LSIIAIAAYS 
YIALIPILQP PVSKLLTTKK ERLIRMKPPR KVSKTEKILF SLITTLVTAL LVPQSLTLVG 
PLMFGNLLRE VGNVKRLVEA ASKYILDTTT ILLCLSVGAS ARADIFLKPQ SLLVFGMGAF 
AFVSALASGI LFAKLMNLFM KDKINPLIGA AGVSAVPDSA RVAQKIAQEE DPTNFILMHA 
MSPNVAGVIG SAVAAGVFLA IFG