| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1296 |
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| Symbol | |
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| ID | 5451637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1398272 |
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| End bp | 1399459 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640875072 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001410800 |
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| Protein GI | 154249975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.650724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGAATA AGTTGATAAT ACTGATTATT TTATCACTTT TTTCTGTTTC TTATTTTGCT
CAAAATTATC AAAGTGTTTA TCAATTGATT AGTTCCAAAG CACCTTTGTC AAGTTACGTA
GGAGTTTATT TTCAAGATAT AGAAAATGGG AATGTACTTG TGCAATACAA TGAACATAAC
CTTTATGTGC CTGCTTCGAT TACAAAAATA TTTTCAACAC TCGTTGCATG GGAAGTGCTA
GGGCCGGATT TTCGATATAC GACAACAGTC TATGTACCAA GAGGAAATAT ATCACCAACA
ATTAATGGGA GCATAATTAT AAAGGGCAAT GGCGATCCTT CTATGAGTGT TGAAATTTTA
AGGGAAAATT TGAAGAAATT TGTATACGAA GGAGTAAAAG AAATAAAAGG TGACATAATA
ATAGACAATT CCTTTTTTTC AAACGAACGT TGGGGAATAG GCTGGGAGTG GGATTACAAA
AATCCAAGTA TAGATGCCCT TATACTTAAA GAGAACACAA ATACATTTAA TCCATACGAT
GAAAACGCTG TGGCTCTTAA TTTTGGATAC AATGTGGTAA ATATACTTAA AGAGTATGGA
ATTAAAGTTT ATGGAAATGT CAAGGTTGGA AAATTAAACC AAAGCTACCG TGAGTTTATA
GTTATAAAAT CTGTCCCACT TTCTAATTTG ATAAGTGTGG CAAACAAATA CAGTAGTAAC
TCTTACGCTG AGCAAATTCT TAGAACTGTT GGTTTAAGAG TTTATGGATA TGGAAATATA
TACAATTCTT TAAAAGTTAT GAACGATTTT TACAGGAAAC TTTTCGGGGA ATACTATCCA
TTTAGATTAA ACGATGCATG CGGCTTATCA ACAAAAAATG TTGTAACCCC GTATATGGTT
GTCAATGTTC TAAGTTATGC ATATAAGAAC GAAGGGGGTT TAAGTGGATT TATATCCACA
TTAGCGGTTT CAGGAAAAGA AGGTACGATG AAAAACCGAT TAGGTGATAT AATAGCGTAT
GCTAAAACGG GTACACTCCA AAATGTTTCA AACATAGCAG GAATAATGAT AACGAGAACA
GGAAGAAAAG TTGCATTTTG TATAATGGTC AATAATTTTA CAATACCAAC ATATGTGGTA
ACTAATTACC ACGATGAAAT AATAAGATAC GTATGGAATA ATTATTAA
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| Protein sequence | MLNKLIILII LSLFSVSYFA QNYQSVYQLI SSKAPLSSYV GVYFQDIENG NVLVQYNEHN
LYVPASITKI FSTLVAWEVL GPDFRYTTTV YVPRGNISPT INGSIIIKGN GDPSMSVEIL
RENLKKFVYE GVKEIKGDII IDNSFFSNER WGIGWEWDYK NPSIDALILK ENTNTFNPYD
ENAVALNFGY NVVNILKEYG IKVYGNVKVG KLNQSYREFI VIKSVPLSNL ISVANKYSSN
SYAEQILRTV GLRVYGYGNI YNSLKVMNDF YRKLFGEYYP FRLNDACGLS TKNVVTPYMV
VNVLSYAYKN EGGLSGFIST LAVSGKEGTM KNRLGDIIAY AKTGTLQNVS NIAGIMITRT
GRKVAFCIMV NNFTIPTYVV TNYHDEIIRY VWNNY
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