Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1236 |
Symbol | |
ID | 5452958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1332127 |
End bp | 1333851 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640875012 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001410740 |
Protein GI | 154249915 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0497288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAAGCA GTCAGAAAAT AACAAAAGTT ATTATGAAAA GAAATGTAAC AATAGCTTTA ATTGTATCAA TAGCTTTTGC TGTTGTCTTT CTTGTGTGGC TTGGAAATTA CATTTCAAAA GAGTCGTTTA AAACACACGA AACACTAAGT AAATCTTTCC AAAATATAGT TGATACACTT TCAAATCTTA TTTTACTCAA CGAAGAAGAA ATAGAGATGC ATATAAATTC TAGTTTGGCA CTTGCAAAAC AACTATTGGA AAATGGGAAT TACAGTAATA TAAACGAAAT AAAGAAAATT TATCAATTTT CACTCTCAAA AAAATTTGTT GATATAGACG TCGTAATATC TAACAAAGAA GGCTCTATAA TTGCAGCTAC GGGCTATTAT TCAAACTTTA GCTTTCTGAA CTTCAAACCC ATTGAAACTA AAATTAGCAA CGCAGATATC ACTGAACAAT ATCCGAAACT TCTTTCATTT GTTGGTTCAA CAAGACGATT GGCGCTCCAT ACATGGGTAA AATTCAAAGA TAACTTTATA GTATTTGCAT TTTATTTAAA TCCTGAGTTT TACGAAAAAC CTATTGAGGC ATTTACAACT AACAAAATAG GAAACATAAA AGATATAGCC ATATATGTAA ATGACAAAAC CCGATTGGAT ACTTCTCAAA CATCATTAGA CAACAAAATA TCCGAGGTAT ATTCCGAAAA GGAAATTCAT CAATTTTTGA AAGTGACATT CTACAAAAAA TTCATACTTT CCAAATATGA TACAATTACT ACACCATTGT ATTTAAGAAT TACAATGGAA TATTTTAATT ATCTATACAT AAGCTTATTG TTTATTTTGG TTTTTGTTGG TACAATGCTC ATTTTTACAT ACACATCTTC AAAATCATCT GTTGATCCGT TCATTAAAGA CTTAGAAAAA TTGGACACCG CTGTCCGAGA AATAGGCAAT ACCGGTATAC TACCACCAGC TGGAAACTTT GTTTTAGCCG AAAGTCAAGA ATTCTACGAA ACACTCTCTG CAATACTTCA AGAACTAAGT GCAACAATGG AAGAATTGGA GGCAACAAAT GAAGAACTTG AAAGAGCATA TAATGATATC GCTAAAAAGA GTGAAGAATT TAAAAATCTA TTGCTTAACA TATCTGAAAG ATTAGCAATT ATAGCTGAAG GTTACGATGA AAATACGGGT CAGCATATAT TCAGGGTTAA GTTACTTAGT GGATTTCTTG CGGAAAAGCT CGGATTGGAC GAAGAAACGG TTGAAAAAGT CAAGATGTTT GCAAGTTTAC ATGATATAGG AAAAATATTT GTTCCGAAAG AAATTCTCCA AAAACCTGGA AAATTAACAG CTGAAGAATG GGAAATTATG CGTCAACATA CAATATATGC CAAAAGAATC TTAGATGTAC CTGGTTTTGA AAGCGCACTT AACATCGCAC TTTATCACCA CGAAAATTAC GATGGAACAG GTTATCCTTT CGGCCTCAAG GAGAAAGAAA TACCTATGGA TGCCCATATA GTAAAACTTG TTGATGTCTA CGATGCCCTA AGGTCTTCAA GACCATACAA GAAAGGATTT ACTCATGAAG AAGCAATGAA TATAATATTA AATGGTGATG GAAGAACTTC ACCTGAACAT TTTGATTCAA AATTACTCGA AGTTTTCGAA GAATATGAAG CTGATATAAA TAGACTTTGG GAAAGTATAA AATAA
|
Protein sequence | MLSSQKITKV IMKRNVTIAL IVSIAFAVVF LVWLGNYISK ESFKTHETLS KSFQNIVDTL SNLILLNEEE IEMHINSSLA LAKQLLENGN YSNINEIKKI YQFSLSKKFV DIDVVISNKE GSIIAATGYY SNFSFLNFKP IETKISNADI TEQYPKLLSF VGSTRRLALH TWVKFKDNFI VFAFYLNPEF YEKPIEAFTT NKIGNIKDIA IYVNDKTRLD TSQTSLDNKI SEVYSEKEIH QFLKVTFYKK FILSKYDTIT TPLYLRITME YFNYLYISLL FILVFVGTML IFTYTSSKSS VDPFIKDLEK LDTAVREIGN TGILPPAGNF VLAESQEFYE TLSAILQELS ATMEELEATN EELERAYNDI AKKSEEFKNL LLNISERLAI IAEGYDENTG QHIFRVKLLS GFLAEKLGLD EETVEKVKMF ASLHDIGKIF VPKEILQKPG KLTAEEWEIM RQHTIYAKRI LDVPGFESAL NIALYHHENY DGTGYPFGLK EKEIPMDAHI VKLVDVYDAL RSSRPYKKGF THEEAMNIIL NGDGRTSPEH FDSKLLEVFE EYEADINRLW ESIK
|
| |