Gene Fnod_1207 details

Gene Information

• Locus tag: Fnod_1207
• ID: 5451532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1298668
• End bp: 1299348
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640874983
• Product: peptidase membrane zinc metallopeptidase putative
• Protein accession: YP_001410711
• Protein GI: 154249886
• COG category: [R] General function prediction only
• COG ID: [COG2738] Predicted Zn-dependent protease

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000375115
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTTTT TCGATCCAAC GTTTATACTT TTAATTCCAG CTTTACTACT TGCATTGTGG 
GCACAAATTA TGGTTCAGTC TAATTTTTCA AAATATTCTA ACGTGCGTTC ACGAATAGGT 
ATGACTGGTT CTGAATTAGC AAGATTTATA TTAGACTCCG CGGGCCTTTA CGATGTAAGA 
ATTGAAAGCA TACCGGGGAC GTTAACCGAC CACTATGATC CAAGAACAAA GGTTGTAAGG 
TTATCACAAT CAACTTACAA TAGTTATTCT GTTGCTGCTT TAGGTGTTGT AGCCCACGAA 
ATCGGGCACG CTATTCAACA TGCGAATCAC TACGTACCAT TGGTTGTAAG AAATGCTATA 
GCCCCTGTCG CAAGTTTTTC ATCAAATCTT GCTTGGATAT TCTTCATAAT TGGTATATTT 
ACAGGTGCAA TGGGGCTCGC GCAATTTGGA ATACTTCTCT TCCTAGCGGT TGTATTATTT 
TCCATAATAA CACTACCTGT TGAATTCAAT GCAAGTAGTA GAGCTCTGAA AATTCTTGAG 
AGAAACCTGC TCATGTCAAA AGATGAGTTA AAGGGTGTTA AAGCTGTACT CTCGGCAGCA 
GCAATGACAT ATGTGGCAGA TACACTAATG GCCATTATGC AGCTTATAAG AATGTTATTA 
ATAGCTAGAA ATAGAGATTG A 

 

Protein sequence

MFFFDPTFIL LIPALLLALW AQIMVQSNFS KYSNVRSRIG MTGSELARFI LDSAGLYDVR 
IESIPGTLTD HYDPRTKVVR LSQSTYNSYS VAALGVVAHE IGHAIQHANH YVPLVVRNAI 
APVASFSSNL AWIFFIIGIF TGAMGLAQFG ILLFLAVVLF SIITLPVEFN ASSRALKILE 
RNLLMSKDEL KGVKAVLSAA AMTYVADTLM AIMQLIRMLL IARNRD