Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1171 |
Symbol | |
ID | 5452542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1259765 |
End bp | 1260769 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640874942 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001410675 |
Protein GI | 154249850 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGATAT TAAAAGTTGA AAATCTCAAA ATGCATTATA AAACAAAGAA AGGTTACGTT AAAGCCGTTG ATGGTATCTC ATTTGAATTG GAATCGGGCG AAAGCCTTGG TATAGTGGGT GAATCCGGTT GTGGTAAAAC TTCTGTTTCA ATGACCTTAT TAAGAATACT ACCTGAGAAC GCTCAATTCA TGGGCGGACA TGTTTGGTTC AACGATAATG GAAAAATGGT TGACTTAGTT TCTCTCCAAG AAGACGAAAT GAGACACTAC AGATGGAAAG GCATATCGAT GGTCTTCCAA GCAGCTATGA ACTCACTAAA TCCCGTTTAC AAAGTCGGTG ACCAAATTGT TGAAGCTATA TTGAACCACT ATCCTGATAC ACCCATTGAT GAAGCAAAAG CAAAAGTCGC AAAACTTTTC GAGTTAGTTA CACTCGACCC TAAACGCATG GAACAATACC CACACCAATA CAGCGGTGGT ATGAAACAAA GGGCTGTTAT AGCCTTGTCC CTTGCTTGTG ACCCAAAAGT AATCATTGCA GATGAACCTA CAACAGCTCT TGATGTTATT GTACAAGATA AAATACTAAG AGAAATGAAG AAAATACAAA AAGAGCTAAA CATGGCAATG ATATACATCT CTCACGACAT CGCAGTTATA GCAGAAGTCA GTGATAAAAT CGCGGTAATG TACGCTGGCA AATTTGTCGA GCAAGCTGAC TCTACGACTA TATTCAAAAG ACCAATGCAT CCTTATACAT TTTTACTCAT GAACGCATTC CCAAGCCACG TTGGTGAAAA AAGAAAACTA TTCACTATTC CAGGTGAACC ACCTGACTTA TTGAATCCGC CAACTGGTTG TAGATTCGCC CCGAGATGTC CTTGGGCAAC GGATAAATGT AGGACAACCG AACCTGAATA CGTAGAAGTT GAGAAGGGCC ATTTCCTTGC TTGCTGGCAT CCACTTACAG AAGAGGTGAG ACAGAATGAG TTCAAAAAAC AATAG
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Protein sequence | MAILKVENLK MHYKTKKGYV KAVDGISFEL ESGESLGIVG ESGCGKTSVS MTLLRILPEN AQFMGGHVWF NDNGKMVDLV SLQEDEMRHY RWKGISMVFQ AAMNSLNPVY KVGDQIVEAI LNHYPDTPID EAKAKVAKLF ELVTLDPKRM EQYPHQYSGG MKQRAVIALS LACDPKVIIA DEPTTALDVI VQDKILREMK KIQKELNMAM IYISHDIAVI AEVSDKIAVM YAGKFVEQAD STTIFKRPMH PYTFLLMNAF PSHVGEKRKL FTIPGEPPDL LNPPTGCRFA PRCPWATDKC RTTEPEYVEV EKGHFLACWH PLTEEVRQNE FKKQ
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