| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1170 |
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| Symbol | |
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| ID | 5452044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1257267 |
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| End bp | 1259759 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640874941 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001410674 |
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| Protein GI | 154249849 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.920623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACA AAATTAATCA ATCAGTGGAA AGCCAAAATA GAAAAGAATC AATTGCTAAG
ATAAAGTTTA AACTCTTTAT CAAGAATTTT AAGAAAAATT GGGCATTATT TAAAGAGAGT
AAAATGGGAA TGTTTGGGTT ATGGGTCATT ATAGCGTTTG GTATATTCGG CGCATTATCA
CCAATTGTTT TAAGAGTGCT TGACCCAAGC ATATACGACC CTGTCGTTGG CCTTGATTCG
AGAATACTCT CAACAAAGTA CATAACCGAT CATCTCTCAA CACAAAATTT GGTTAAGGGT
ATAGAAATCC CATCCGCTCA ACTTTGGGTT TACTCTTTCA TGGATAAAGG AGAAGCGTTT
AAATCTTCAA TGGAGAACCT CGTTAGAAAT TCCCAGTACG AGATAATGAC AACATACGCA
CCAGATAGCT TTAGACACCT ACTTGACACA ATTGCAGATA GTTACATACC AACAAAGGAA
AGATTGTATT TCCAAACAAG TGTTTCAGAA CTCGTCGACC ATGGCTTTAT AAAATTTTCG
CCAATTTCCT CAGCAAAAGA TATAGGCAAC AGGGATAAAT TTTCATTTTC TGATTTCTCT
GAATTATTAC AAAAAATTGA TTATAAAACT CTTGCCATTG CGCTTTCAAA CTATAAAGAT
TCTGATGAAG TATCACGCGT TATCCTTTGG TTCAGAAGCT TAAATAGAGA CAAACCAGAA
GTTGTTGAAG AATTCAATAA TCTCCTCATG CAAACATATT CAAGCGAAGA AGTCGAAAAT
GCAGAAAAGC AAGTATTAGA AGTAGCTAAA AGTGTTGCAA ATGTAAGTAC AACTGGACAG
TTGTATGTGC AATCTGATAC ACAACTTTCA GAAGTTATTC AAAATAACAT AGTACCAGTT
GAATCGTTAG TCTATGCTGC AGCATTTAAC GTTATTCCAG ATTTACTTGT TCTATCAAAA
GAAAATGGAA AAATTGAGGA ACAGATAAGC AACAGTAAAT TCTCTGTTTT ACTCAATTAT
GCAAAATCGA AACTTTCAGA TCTTTCAAAT AAAGATATAT ACACCTCAGC GCTTTCAAAG
GCTAATAGAA CAATAAAAAC AATTGAAGAA GAAATGAAAT CCATAGGACT TGAAGTATCA
CACGAAAATA CCGCTGAATT CCTCGAAATT TACGCAGGTA TTGTTTTATC AAAAGTTTCA
ATAGATCTAA ATCCTGAGTT AAGAGCAAAA CTGGAAAATG AGCTTGGAGA ATATTCCTCA
AATGTTAGAA AGGGATTTGT CTATGAATTG AACAACGCAT TTATAAAAAT AGCTACAGCG
AGGTCATTTA TGGCTTCTTT ACTTAACGAC GAAAACATAC CAGATAATTA CGAAATGTTA
GGTAGTAAAG TTATAAAAGT TCTTTCAGAC CCAATAACAT CCTTAATGGC TTACGCATAC
CAAGGAACGA AAAAACTAGA CAAAGTTATA GCAAATATTG AAAATTCTCA GCTTGATGAT
TTCAAACGTT TAGATATAGT TGAAAAATTA AAGAGCTATA AAGAGCCTGT TGAAGCTGCA
AGATTTTTAA TCGGTGAAGG TGATATAAAC GATAATATTT ACTATAGAAT GTTAAATGAA
CACAAACAAT ACTTGAGTGA TACATCCGCA TGGGCAAATA TTAAAGATAT AAAAGATTAC
GAAAAGCCAC AGAAAACAAA TTGGTCGAAA GAATTTGCGG AAAAGAAACT TGTTGAAATA
TTTAACACAC TTTCTATAAC AAATAAAATA GGTGTTGGAC ATCCACTCCC ACCAAGTAGA
TGGCATTGGC TTGGTACAGA CCCAGTTGGT AGAGATATCT TCGTCCAACT TATGGTTAGT
ACCCCGAGTG AATTTGTACT TGGTGTTCTT GCTGCTTTGA TTACTGTCGT AATCGGTACA
ATTATAGGTA CAGCAGCCGC ATACTACGGT GGTGCTGTTG ACATCATATT CATGCGAATA
GCGGACCTTA TGATGCTCTT CCCATCAACA GCATTCTTAA TTGTTCTTTC CGGCTTCATG
ACGATGAATC TGTTCAAACT CGCAATTATT CTCGGTTTAC TCGGTGGTTT TGGTGGCATA
ACACTTGTTC TCAAAGCTCA AGCTTTAACG ATAAAAGTTA AGCCATATAT TGATGCTGCG
AGAGTATCTG GTGGAAGCCA CGGATACATA ATATTCAATC ACATAATTCC AAATGTTATG
CCACTTTCAT TCCTATACAT GATGTTCAAT GTAACTGGTG CTGTCTTCTC CGAAGCAGTG
CTCAGCTTCT TTGGGCTTAT GAAAGTTAGA ATGTCATGGG GATTGATGAT AAATACAGTT
TGGAGTTCAG GATATCTCGG CTCTGGCAAC ATAGGTGCTT ATTGGTGGAT GTGGGTACCA
GCAGGTGGAG CTATTACACT GCTGTGTGCA GCATTCTACT TCCTCGGAAG AGGTCTTGAA
GAAATCGTCA ACCCAAGACT TAGAAAGAGG TGA
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| Protein sequence | MANKINQSVE SQNRKESIAK IKFKLFIKNF KKNWALFKES KMGMFGLWVI IAFGIFGALS
PIVLRVLDPS IYDPVVGLDS RILSTKYITD HLSTQNLVKG IEIPSAQLWV YSFMDKGEAF
KSSMENLVRN SQYEIMTTYA PDSFRHLLDT IADSYIPTKE RLYFQTSVSE LVDHGFIKFS
PISSAKDIGN RDKFSFSDFS ELLQKIDYKT LAIALSNYKD SDEVSRVILW FRSLNRDKPE
VVEEFNNLLM QTYSSEEVEN AEKQVLEVAK SVANVSTTGQ LYVQSDTQLS EVIQNNIVPV
ESLVYAAAFN VIPDLLVLSK ENGKIEEQIS NSKFSVLLNY AKSKLSDLSN KDIYTSALSK
ANRTIKTIEE EMKSIGLEVS HENTAEFLEI YAGIVLSKVS IDLNPELRAK LENELGEYSS
NVRKGFVYEL NNAFIKIATA RSFMASLLND ENIPDNYEML GSKVIKVLSD PITSLMAYAY
QGTKKLDKVI ANIENSQLDD FKRLDIVEKL KSYKEPVEAA RFLIGEGDIN DNIYYRMLNE
HKQYLSDTSA WANIKDIKDY EKPQKTNWSK EFAEKKLVEI FNTLSITNKI GVGHPLPPSR
WHWLGTDPVG RDIFVQLMVS TPSEFVLGVL AALITVVIGT IIGTAAAYYG GAVDIIFMRI
ADLMMLFPST AFLIVLSGFM TMNLFKLAII LGLLGGFGGI TLVLKAQALT IKVKPYIDAA
RVSGGSHGYI IFNHIIPNVM PLSFLYMMFN VTGAVFSEAV LSFFGLMKVR MSWGLMINTV
WSSGYLGSGN IGAYWWMWVP AGGAITLLCA AFYFLGRGLE EIVNPRLRKR
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