| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1148 |
|---|
| Symbol | |
|---|
| ID | 5451995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1234703 |
|---|
| End bp | 1235923 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640874919 |
|---|
| Product | Ste24 endopeptidase |
|---|
| Protein accession | YP_001410652 |
|---|
| Protein GI | 154249827 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTATTA AAGTTTTAAT ACTGCTAGTT ATTTTCAAAG AAATTTGGGA AGTAGTACTA
AGCTTGGCAA ATTTGAAATA TTCTTTAAAC ACCAAAAATG TACCTGATAT TTTATCGGAC
ATTATGTCTG CGGAAAATTT CGAAAAAGCA AAAAGATACC TCAAAGACAG AACCATGTTT
TCTGCTGTTT CAACTTTAGT AAATCTTATT GTTACCTTGG TTTTCTTGCT AAAAGGTTAT
CCATTTCTTG AAAAAATAGT TAGTAATTTA ACTGCAAACG TATATCTACA AGCATTACTC
TTTGCTGGTA TATATGGTTT AATAGATTTT CTAATCGATT TGCCATTCAA ATTATTTTCT
ACATTCGTTA TAGAGCAAAA ATATGGTTTC AACACAACTA CACTTAAAAC TTTTATATTT
GACAGCTTAT TATCCATAGT CTTAATTGTA ACTATAGCCA CTCCAATTTT GATTGGCTCA
ATGTGGTTTT TAACACATTT CACAATTTGG TGGTGGCAAT TATCAATCCT TGTATTTTTA
TTTTTATTAT TTTTCTCATA CATTCAACCA ATTCTCATCG CACCACTATT TTATAAATTC
ACAGAACTTA AAGATGGAGA ATTAAAAGAA AAACTAAAAA AACTTTTGAC TAAGTCTGGC
GTAAAAGTTC CAAACATCTA CGTTATGAAC GCTTCAAAAA GAACAAAAAA ACAAAACGCA
TACCTTACTG GAATTGGTAA GGCAAGAAGA TTAGTCTTGT ATGATAACAT ACTTAAGCAA
ACGGATGATG AGATATTAGC AGTTGTTGCT CATGAACTTG GTCATCATGC GCATAGACAT
ATAGCTAAAC TCATAGCCAT ATCATCAATT TCTACAACAT TAGTATTACT ATTTAGCAAT
TTTGTTTATC TGTATCTTTT CCAAATACAA CCATTTGGCA TTTCAAAACC TTACACTGTT
ATTTTTTACA CATTTACATT TATAAGTGCT TTGATTTATT TTGTTGAGCC ATTGCTTAAT
TATTTACAAA GAAAAATGGA ATACGAAGCA GACGGATATT CCGCAAAAAT CACAGAAAAC
CCAGACTATA TTATTTCAGC ACTCAAAAAG TTGGTAAAAG AAAATTTATC AAATCCAAAT
CCTTTGCCAC TCTATAAAAT CTGGTACTAC AATCATCCCG CTCCAGAGGA AAGGATAAAA
CACCTTTTGA ATTTAAAATA A
|
|---|
| Protein sequence | MFIKVLILLV IFKEIWEVVL SLANLKYSLN TKNVPDILSD IMSAENFEKA KRYLKDRTMF
SAVSTLVNLI VTLVFLLKGY PFLEKIVSNL TANVYLQALL FAGIYGLIDF LIDLPFKLFS
TFVIEQKYGF NTTTLKTFIF DSLLSIVLIV TIATPILIGS MWFLTHFTIW WWQLSILVFL
FLLFFSYIQP ILIAPLFYKF TELKDGELKE KLKKLLTKSG VKVPNIYVMN ASKRTKKQNA
YLTGIGKARR LVLYDNILKQ TDDEILAVVA HELGHHAHRH IAKLIAISSI STTLVLLFSN
FVYLYLFQIQ PFGISKPYTV IFYTFTFISA LIYFVEPLLN YLQRKMEYEA DGYSAKITEN
PDYIISALKK LVKENLSNPN PLPLYKIWYY NHPAPEERIK HLLNLK
|
|---|
| |