Gene Fnod_1138 details

Gene Information

• Locus tag: Fnod_1138
• Symbol: rplC
• ID: 5452591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 1223349
• End bp: 1223972
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640874906
• Product: 50S ribosomal protein L3
• Protein accession: YP_001410642
• Protein GI: 154249817
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000858376
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTA TAATTGCAAG AAAAGTTGGA ATGACCAGAT TATGGAAAGA TGAAAAGGTT 
GTTCCAGTAA CAGTTCTTAA AGCGGGTCCA TGTGTTGTTG TCCAAAAGAA GACTGTTGAA 
AAAGATGGAT ACAACGCAAT ACAACTTGGT TTTGAAGAAG TTAATGAAAA GAAACTCACA 
AAACCAATGC TTGGTGTTTT TAAAAAAGCA AATGTTAAAC CAATGAGAGT TTTAAAAGAG 
TTCAGAGTAG AAAATGTTGA CCAATATTCA GTTGGTCAAG AAATAACAGT TGCAATTTTC 
CAAGAAGGCG ATAAAATAGA CATTACAGGA TGGACAAAAG GTAGAGGTTA CTCTGGTGCA 
ATGAAAAGAT GGAACTTCCA AGGTGGACCA AAAGCACACG GTGCAAAATT CCACAGAGAG 
CTTGGCTCTG TTGGTCAACA CACTGAACCA GCAAGAATAT TCAAAGGTAA AAGAATGCCT 
GGAAGATATG GTAATGAAAG AGTAACAATT CTTAACTCTG AAGTAGTCAC AATTGATGCG 
CAGAACAACC TTTTAGCAGT TAAAGGTGGA GTGCCAGGAG CGAGGGGCAG CCTTGTTATT 
ATAAGGAGCG CTGTCAAGCA ATAA 

 

Protein sequence

MKFIIARKVG MTRLWKDEKV VPVTVLKAGP CVVVQKKTVE KDGYNAIQLG FEEVNEKKLT 
KPMLGVFKKA NVKPMRVLKE FRVENVDQYS VGQEITVAIF QEGDKIDITG WTKGRGYSGA 
MKRWNFQGGP KAHGAKFHRE LGSVGQHTEP ARIFKGKRMP GRYGNERVTI LNSEVVTIDA 
QNNLLAVKGG VPGARGSLVI IRSAVKQ