Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1137 |
Symbol | rplD |
ID | 5451919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1222570 |
End bp | 1223241 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640874905 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001410641 |
Protein GI | 154249816 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000824266 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACAGG TAACATTGTA TAACATTAAA GGTGAAAAGA TCGGTAACAT CGAAATTGCT GATGAAGTTT TTAACGTTGA ACCAAACCTT GATGTCATGT GGCGCTATAT CGATATGCAA CTTACAAACT CGAGAGCAGG GACAGCATCC ACAAAGACAA GAGGAGAAGT AGCTGGTGGC GGAAGAAAAC CATGGCCACA AAAGCATACA GGTAGAGCAA GACAAGGTTC CATAAGAGCA ATTCACTGGA GACACGGTGG TGTTGCACAC GGTCCAAAAC CAAGGAATTA CCTTAAGAGA TTGAACAAAA AGATGAAAAA ATTAGCACTT AAATCAGCAC TTTCTGCTCG CTTCCAGGAA GGAAACCTTA TTGTTGTGAG CGACATACGA TTTGAAAAGG CTCAAACAAA ACAAATGAGA GAAGTTCTTA AGAATCTTGG AATCGCTGAC GAGAAAGTAT TGTTTGTTCT TCCAAGAAAA GAAGAAGTAT ACGAAAATGT AAAACTTTCT GGAAGAAACA TTCCTGGAGT AAAAGTAATA ATTGCCGATA ATCCAAACAA CGGGAATCCG GTAAACATCG ATGGTTTGAA CGTTTACGAT ATAATCAACT CTTCAAAGGT TGTCCTTACA GAGGGCACCG TTCGCAAAAT TGAGGAGGTG CTCAGCAAAT GA
|
Protein sequence | MAQVTLYNIK GEKIGNIEIA DEVFNVEPNL DVMWRYIDMQ LTNSRAGTAS TKTRGEVAGG GRKPWPQKHT GRARQGSIRA IHWRHGGVAH GPKPRNYLKR LNKKMKKLAL KSALSARFQE GNLIVVSDIR FEKAQTKQMR EVLKNLGIAD EKVLFVLPRK EEVYENVKLS GRNIPGVKVI IADNPNNGNP VNIDGLNVYD IINSSKVVLT EGTVRKIEEV LSK
|
| |