| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1118 |
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| Symbol | secY |
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| ID | 5452565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1213639 |
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| End bp | 1214925 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640874886 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001410622 |
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| Protein GI | 154249797 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.348488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAG CGCTGCGAAA TGCGATGAAA ATTCCAGAGG TAAGGGATAG GGTTATCTTT
ACATTCTTAA TGTTGCTTGT TTTCAGATTG GGTATTTATG TCCCGGTTCC AGGAATAAAT
ATCAAAGCTT GGGGGGAAGC GCTTTCCAAA CAAGGTACAG GTCTTGCTGG AGGCGTTCTC
AGCTTTTATG ATGTTTTCAC CGGAGGTGCT TTCAGCAGAT TTTCCGTATT CTCAATGAGC
GTTACTCCAT ACATTAACGC ATCTATTATC ATGCAGCTTC TTGCTTCCAT CATTCCTTCT
TTGAAAGAGC TCTTAAAAGA AGGTGAAGAA GGTAGGAAGA AATTCCAACA CTACACAAAG
AATCTTACAC TTGGATTGGC AGCATTACAA TCATTCGTAG TTTCTTTTGG TCTTGCAAGA
AGTTACCAAG GAATCATCGC AATCAATACG TGGTTATTCT CATTTGTTTC AACAGTTTCC
TTGGTTGCTG GTACAATGTT CCTTCTTTGG ATTGGCGATA GAATTACAGA AAAAGGTATT
GGAAATGGTG TTAGTATAAT GATATTCGCA GGTATTGTTT CAAGATACCC AGCATATTTC
AGAAGTGCGG TTCTTGGTAA TCTTAATATA TTCGGTTGGA TATTCCTTAT CGCAGTTGCA
ATATTTATGG TTGTTGCAAT TATATACGTT CAACAAGCGG AAAGAAGAAT CAAAATTGAA
TATGCAACAA GAATGGTTGG AAGAAGGATA TACGGTGGAA CAAGCACATA CTTGCCTATA
AAAGTTAATC ACTCAGGTGT TATTCCTATC ATATTTGCAT GGGCAATAAT TAGTATTCCA
GAAGCAATTG CGCAAATCAC AGGTGCTCAG TGGGCAATTA AACTATTCAG CATGCAAAGT
CCTCTCATGA TGATAATTTA CGCGCTCTTG ATATTCTTCT TCACATACTT CTACAGTGTT
GTTGTTATTG ATCCAAAGGA TATATCCGAA AATATTAAGA GATATGGAGG ATTTATACCA
GGAATAAGGG CAGGAAAACC AACAGAGGAA TACATTACGT TCGTTCTCAA CAGAGTTACA
TTCCTCGGAG CGATCTTCCT TGTTGGTATT TCACTGTTAC CTTACTTAGT TGAAGGAATT
ACACGTGTAA ATATTTGGCT TGGTGGTACA AGTGCGCTTA TCGCGGTTGG AGTTGCTTTA
GATATTGCTC AACAAATCGA AGCACACTTG ATTATGAGAA ATTACGAAGG CTTTGTTAAA
AAAGGAAAGA TAGCTGGTAG AAGATAA
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| Protein sequence | MWKALRNAMK IPEVRDRVIF TFLMLLVFRL GIYVPVPGIN IKAWGEALSK QGTGLAGGVL
SFYDVFTGGA FSRFSVFSMS VTPYINASII MQLLASIIPS LKELLKEGEE GRKKFQHYTK
NLTLGLAALQ SFVVSFGLAR SYQGIIAINT WLFSFVSTVS LVAGTMFLLW IGDRITEKGI
GNGVSIMIFA GIVSRYPAYF RSAVLGNLNI FGWIFLIAVA IFMVVAIIYV QQAERRIKIE
YATRMVGRRI YGGTSTYLPI KVNHSGVIPI IFAWAIISIP EAIAQITGAQ WAIKLFSMQS
PLMMIIYALL IFFFTYFYSV VVIDPKDISE NIKRYGGFIP GIRAGKPTEE YITFVLNRVT
FLGAIFLVGI SLLPYLVEGI TRVNIWLGGT SALIAVGVAL DIAQQIEAHL IMRNYEGFVK
KGKIAGRR
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