Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1090 |
Symbol | |
ID | 5451524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1189387 |
End bp | 1190166 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640874858 |
Product | ABC transporter related |
Protein accession | YP_001410595 |
Protein GI | 154249770 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAACA CGAAAAAAAT TGTAATTTCC TTGGAGAATA TATCATTCTC TTACGGTGAA AATTTTGAGT TAAAGGATAT TAGCCTATAC GTAGAAGAGG GAACGTTCTT CGGTATAATA GGTCCAAACG GCTCGGGTAA AACAACACTT TTATCACTAA TAATGAAATT TCTAAAACCC GCTTCGGGAA AAATTATGAT AAACGGAAAT GATATTAAGC ATATGTCACA CAAAAAGATA GCACAAAACA TTGCGTACAT AGCCCAAGAT TTCAACCCAT CTTACGATTA TACAGTTGAA GAAATAGTGG AAATGGGAGG CATAGCTCAC TCAAAAAATT TCTTTGATAC AGAAGTTGAT GAATCGAAAC TTATAAATGC TCTTAACACT GTTAATTTAG TAGAGTACAG AAAAAGACCA TTTTCAACAC TCAGTGGTGG TCAACAAAGA CGCGTCCTTA TTGCAAGAGC GATTTACCAA AATACACCAA TAATAATCGC AGATGAGTTG ATAAATCATC TTGACATAGG TCAGTCTGTA AAAGTGATGG ATTACTTAAA ATCGTTAACA AAAATGGGAA AGACTGTATT AGGAACTTTC CACGATATAA CCATCGCTGC GAAATACTGT GACATAATAG CACTTATGAA AGATGGCGAA ATAACCAAAG TAGGTACACC AAAAGAAATC ATAAATAAAG ATATTCTCGA AAAAATATAC GATATAAACT TAAAGATTAT ACACTCTCCA GATGTAGAAT ACCCAATTAT AGTTATTTGA
|
Protein sequence | MSNTKKIVIS LENISFSYGE NFELKDISLY VEEGTFFGII GPNGSGKTTL LSLIMKFLKP ASGKIMINGN DIKHMSHKKI AQNIAYIAQD FNPSYDYTVE EIVEMGGIAH SKNFFDTEVD ESKLINALNT VNLVEYRKRP FSTLSGGQQR RVLIARAIYQ NTPIIIADEL INHLDIGQSV KVMDYLKSLT KMGKTVLGTF HDITIAAKYC DIIALMKDGE ITKVGTPKEI INKDILEKIY DINLKIIHSP DVEYPIIVI
|
| |