| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1029 |
|---|
| Symbol | |
|---|
| ID | 5451818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1127203 |
|---|
| End bp | 1128042 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640874790 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410535 |
|---|
| Protein GI | 154249710 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2035] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGCA TAATTAAACC TATTTTTGCA GGCTTTTTGA TGGGATTAGC AAATGTCATA
CCGGGAGTTA GCGGTGGCAC AATAGCTGTA ATCACAGGTG TCTTTGAAAG ATTGATAGAT
ATAATAAATA AAATAACTAA AATATCATTA AAAAAGAAAG ATTTCATATT TATACTTATC
TTAGGAATAG GGCAAATTAT CGGTCTTTTA AGCGGAAGTA AGGTATTATC TTGGGCATTT
AACAACTATT CATTTTACAC ATACAGCTTC TTCTTTGGCT TAATCCTTTT TTCACTTTTT
AATTTGAAGA AAGACATAAT GAAATTTAAA ATACTTGAAT TCGCCATAGG TGCGGCAATT
GTAATAATCC CATATATATT ATCTCACTCA AATGGTTCAA TTAGTGTAAC AAAGCCCACT
AATATTAACT ATTTTTACCT ATTCGTCTCT GGTGCCCTTG CAGGTGCCTC GATGATTTTA
CCGGGTTTAA GTGGCTCTTT AGTATTGATG CTCCTTGGAT TTTACGAAAG AGCTATAGAT
ACGGTCTCGA AGATAACAAA TATAAAATCT GGGAATTTCA ATTCAAGTGA TTTGCTATTT
CTAGTTATCC TTGGATTTGG CGTACTTTTT GGTATAGGAA TAATCGCAAA AGCCCTCAAA
GTCTGGTTTG AAAAAGCAAG AGAATCAATT TTGAACTTCA TTCTTGGACT CGTTGCAGGC
TCTCTTTACC CAATAACTCC TTCGTTCCAC GGTAGAGGTA GCACATTATG GATGCTTACA
TGGATAGCAA TAGGTAGTTT ATCTGTATTA TTAATAGAAA AAGTTAACAA AAACCAATAA
|
|---|
| Protein sequence | MDSIIKPIFA GFLMGLANVI PGVSGGTIAV ITGVFERLID IINKITKISL KKKDFIFILI
LGIGQIIGLL SGSKVLSWAF NNYSFYTYSF FFGLILFSLF NLKKDIMKFK ILEFAIGAAI
VIIPYILSHS NGSISVTKPT NINYFYLFVS GALAGASMIL PGLSGSLVLM LLGFYERAID
TVSKITNIKS GNFNSSDLLF LVILGFGVLF GIGIIAKALK VWFEKARESI LNFILGLVAG
SLYPITPSFH GRGSTLWMLT WIAIGSLSVL LIEKVNKNQ
|
|---|
| |