| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0953 |
|---|
| Symbol | |
|---|
| ID | 5452335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1042141 |
|---|
| End bp | 1042920 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640874713 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_001410460 |
|---|
| Protein GI | 154249635 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.108307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC TGCTTGTAAA CGATGATGGC GTGACAGCAC CAGGTATATT ATGCGCCGCC
AGATATTTGA GTAAAGAGCA TTACGTTGTT GTTTCCGCTC CCGAATCAGA GCAAAGCGCT
GTGGGGCATG GTATAACGTT GAGATTTCCA CTGTGGGCAA GGAAGTTGGA TATAAACGAG
CCATTCGAGA TGTACGCAGT CTCAGGTACA CCCGCAGATT GTGTTAAGAT AGGACTTGAC
GTTATATACA AAGACAAGGG TATCATGCCA GATGTTGTGA TAAGTGGTAT AAATCGTGGT
GAAAATTTGG GAACGGATGT TGTTTACTCT GGAACAGTCA GTGGTGCACT GGAGGGAGCG
ATAGCCGGAG TACCATCGAT AGCTATTTCC GTGGCTGATT TCAAAGACCC AATATACGAA
ACAGGCGCGA GATTCTTATT GAATTTTTTG AAAGAATTCG ATGTAAAAAG AATACCAAGA
TTTACAGCTT TGAATATAAA CGTACCTTCG GTGCCATATG AACAAATCAA AGGTTGGAAG
CTGACAAGAC AAAGCAAGAG AAGATACGAA GATTACTTTG AAAAAAGGAT AGACCCTTAT
GGAAAAGATT ACTATTGGAT GTTGGGAGAT ATAATCGAGG ATGATCCCGA CCCAAAAGCC
GATTACAAAG CGCTTAAGGA AGGGTATATC TCCGTAACTC CCATAACGAT ATTTATGACA
AACGAAGAGT TACTTAAAGA ATTGGAGGGA ATATACGGTG ACGGTAAGAA TTTTAGGTGA
|
|---|
| Protein sequence | MNILLVNDDG VTAPGILCAA RYLSKEHYVV VSAPESEQSA VGHGITLRFP LWARKLDINE
PFEMYAVSGT PADCVKIGLD VIYKDKGIMP DVVISGINRG ENLGTDVVYS GTVSGALEGA
IAGVPSIAIS VADFKDPIYE TGARFLLNFL KEFDVKRIPR FTALNINVPS VPYEQIKGWK
LTRQSKRRYE DYFEKRIDPY GKDYYWMLGD IIEDDPDPKA DYKALKEGYI SVTPITIFMT
NEELLKELEG IYGDGKNFR
|
|---|
| |