Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0951 |
Symbol | |
ID | 5451795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1039513 |
End bp | 1041000 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640874711 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_001410458 |
Protein GI | 154249633 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000274042 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTAT TAATTAACAT AATTTCTTTC TTAGCAGTAT TCATGTTCAT TGTTGTTGTA CATGAGTTTG GGCATTTTCT CTTTGCCCGT CTGTTCGGTG TAAAGGTTCA CGAATTTGCG ATTGGATTTG GACCAGAGAT TTTTAGAAAG AAAGGTAAAA AAACAGACTT CAGGATTAAC ATATTCCCAC TTGGTGGGTA TGTTCGCTTG AAAGGTGAAG ACCCATCTGA AGAGGAAGAC CCAGATTCTT TGTATGGAAT ATCCGCATGG AAGAGATTTC TTGTTGTATT TGCTGGACCT TTATTTTCCA TATTAGCGGG ATATTTGCTT TTTGTAATCA TCATTTCCGC ATGGGGATAT ACACCTATAA TCATCGATAA AGTAATCCCT AACTCGGCAG CTGAAGAGGC AGGTTTGAAA GATGGAGATA TCGTTTTAAA GTTAAATGGT AAGTACATAT TTGATACGGT CGATATGACC GATTCAATAA GAAAGGGAAG AGCTATAGAA CTTGAGATTC TTAGAGATGG GCAGAGAATG AATTTAGTGG TCACACCAAA ACTTTCTAAC GCCCAGTATT ATCTTTACCT AAAAGATGTG CGTGGTGATA TAGGCGGAAA AATAGAAACG GTAAATAATT TAGAGTTTGA AACGTATGTT AAAAATTACA AGAAAGAGCT AGTTACGATA AAATCTGAAG CAGGAGAGCT TAATTGTGTT ATAGATAGTC TAAATTCTTT GCCTGAAAGA TACACGATAG GTATTTATTA CGGCCAATTT TCAAATGTTT TCGCTAAAGA TGTTGAACCA TTCAAAGTCG GAGATAATCT ACTGCAAGTT GAAGATATGA AAATCCAAAG TGGCACAGAT TTACTCGACC TTGTAACAGC TCTTAATCTG AAACCCGATG AGTTATACGT GGTAGCGAAT GGTAACGTAG TTGAAAGCGT TGTAAAACCT CTTCCAGAAA GGGTAAAAGT TGTGTACTCA ACTTCCAATG GTGAAATTAA GGAAATCGTC TTGGATAAAT CAAAATTACT TGAAGCACTT TCAACGCCAG GTGCTTTAAA AGAAAGAAGT ACAAGGTTAA AACCAAGGGG TATCGAAGGG ATAAAATTAG CAATCGCAAG AAGTAATAGA TTAGCGTTGT ACATTTGGAA AACATTACCC GGTATATTCG TTGGGAAGAA CATTCAAGAT GTCACAGGAC CTGTTGGAAT GGTACAGATA ATAGGACAAG CTGCGCAAAT TGGTCTTGAA ACAATTCTCA CCATCGTCGC TGTGATAACA ATTAACCTTG GTATATTCAA TTTGTTCCCA CTGCCAGCAC TCGATGGTGG AAGGATAGTA TTCGCGTTAA TCGAGATGAT TACTAGGAAG AAGATAAATA GGAATGTTGA GAATATAATC CATACGATAG GTTTCTTTAT ACTATTGGGG CTTGTGATAT TCATAACGTT TATCGATATT GGAAGATTTT TTAGATAA
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Protein sequence | MTVLINIISF LAVFMFIVVV HEFGHFLFAR LFGVKVHEFA IGFGPEIFRK KGKKTDFRIN IFPLGGYVRL KGEDPSEEED PDSLYGISAW KRFLVVFAGP LFSILAGYLL FVIIISAWGY TPIIIDKVIP NSAAEEAGLK DGDIVLKLNG KYIFDTVDMT DSIRKGRAIE LEILRDGQRM NLVVTPKLSN AQYYLYLKDV RGDIGGKIET VNNLEFETYV KNYKKELVTI KSEAGELNCV IDSLNSLPER YTIGIYYGQF SNVFAKDVEP FKVGDNLLQV EDMKIQSGTD LLDLVTALNL KPDELYVVAN GNVVESVVKP LPERVKVVYS TSNGEIKEIV LDKSKLLEAL STPGALKERS TRLKPRGIEG IKLAIARSNR LALYIWKTLP GIFVGKNIQD VTGPVGMVQI IGQAAQIGLE TILTIVAVIT INLGIFNLFP LPALDGGRIV FALIEMITRK KINRNVENII HTIGFFILLG LVIFITFIDI GRFFR
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