| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0907 |
|---|
| Symbol | |
|---|
| ID | 5452447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 983337 |
|---|
| End bp | 984269 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874667 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_001410414 |
|---|
| Protein GI | 154249589 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000822843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT TGTTTATGGG CACTCCTGAA TTTGCCGCGA GTTATTTAGA TTTTCTTATT
CAAAAAAAAT TTAACGTCGT TGCTGTTATT TCACAAAAAG ACAAGCCACG AGGCAGGGGG
CAGAAATTAT TGCCTACCCC GGTTAAAGAG GTGGCTCAAA AGTACGGTAT TCCCGTTTTC
CAACCTTCAA AACTAAATGA AGAAGGGTTA GAAATTATTG AGAACTACAG ACCAGATATT
GGTATAGTCG TCGCCTATGG TAGATTGTTA AGAAAACCAT TTTTAGATGC TATTCCACTT
TACAATGTTC ACACATCGCT CTTACCGAAA TACAGGGGCC CTGCCCCGAT GCAGAGAGCT
ATCGAAAATG GCGAAAGAGT TACAGGCGTT ACTATATTCA AAATAAGCGA AGGTATGGAC
GAGGGCGATA TTGCTTTGCA AAGAGCTTTT GAATTAGAAG AATGTGAACC ATTTGGAAGT
GTTTACGAAA AGTTTATAAA ATATGGCACA GAACTTCTTC AAGAATTTCT AAGAAATTAT
CCAGTCACAT TAACCCCGCA AGACCACTCA AAAGCGACAT ACGCGCCTAA AATAGAGAAA
AAAGATTTAT ACGTTGATTT CTCAAAACCA GCGGTGGAGG TAAGAAATAA GATTAGAGCT
TACGATCCAA CTCCTGGCGT GCGAACGTTT TTAAATGATA TAGAAGTTAA ATTGTATGGT
GCATGCGAAA TAGAAAGCAA TTCCCAAGAG AATATTGAAC CAGGTACTGT TGTAAGGATT
GAAAAGCAAT CTGGTGATGG TGTTATAAAG ACTATCGATG GTCTCTTACA TATAAAATAC
ATCCAATTTC CGGGGAAAAA TAAAATAACA TTCCTTTCGG CAAAAAACGG TGGGCTCATA
AAGGAAGGAA TGGTATTTAG AAATTTAGAT TAA
|
|---|
| Protein sequence | MRILFMGTPE FAASYLDFLI QKKFNVVAVI SQKDKPRGRG QKLLPTPVKE VAQKYGIPVF
QPSKLNEEGL EIIENYRPDI GIVVAYGRLL RKPFLDAIPL YNVHTSLLPK YRGPAPMQRA
IENGERVTGV TIFKISEGMD EGDIALQRAF ELEECEPFGS VYEKFIKYGT ELLQEFLRNY
PVTLTPQDHS KATYAPKIEK KDLYVDFSKP AVEVRNKIRA YDPTPGVRTF LNDIEVKLYG
ACEIESNSQE NIEPGTVVRI EKQSGDGVIK TIDGLLHIKY IQFPGKNKIT FLSAKNGGLI
KEGMVFRNLD
|
|---|
| |