| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0881 |
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| Symbol | |
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| ID | 5452586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 955142 |
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| End bp | 956530 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874641 |
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| Product | hypothetical protein |
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| Protein accession | YP_001410390 |
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| Protein GI | 154249565 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000540176 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAA ATATTACCGT TTCCTCTGAT AAAATGGAAG CTTATCTTAC TGTTAATAGT
GTTTTCCCAG ACGAAACAAT AACATTGGAA TCACTAATCG AAGAAATACG AAATGCAAAA
ATTGTCCACG GCATCGATTA TGATGCATTA AGGTCTTTTT GCCAAAACCC TACTATTGGT
GTACAACTGT TATTTGCACA CGGGGATAAA CCAAAAGATG GTGAAGATGG TAGAGTTGTC
TTTGAATTTA AAGAAACGAG CTCAGCTCAA ACAATTTTGT CTGGAAATAA AGTTGATTTT
AGAGAATTTC CTGTTCAAAA AAGAATAATT GTAAAAAAAG GACAAAAAAT AGCATCAATT
TTCCCACCTA CGGAAGGAAT CCCAGGAAGG AATGTATATG GCGAACCTGT TCCAGCAAAG
AAAGGAAATG AAGCGAAGAT TGTACTTGGA AAGAACGTTT CATTAAGTGA AGATGGTAGG
CATATCATCT CAACAACAGA CGGAATATTA AAAGTTGACC CAGAAAAAAA CATAATAGAA
GTTAGTGAAT ATTTAGAAAT TGAAGGTGAT GTTGATTATA GTACAGGAAA CATAGATTTC
CCTGGATCTG TATTTGTTAA AGGAGATGTT AAACCAGGAT TCGTGATAAG GGCAAAGGGT
GATATAGAAA TTAACGGTGT TGTTGAGGCA TCAAGTATAA TATCATTAGA AGGTAACGTT
AAAATCAGTG GGGCAAAAGG TAAAGATAAA GGTTTGATAA AAGCAAAAAA AGATGTCTAT
TTAAAATATG CGGAGTCAAC AACTATCGAA TGTGAAAACT TATTTTTTGA GCACGAATTA
TTAAACTGTA CTGTCAGGGT CACTAACTCA ATTATAGGAA AAGGTAGAAA TTCATCAATA
ATCGGTGGTG AATACATCGC ATCAAACCTT ATAGAAGCAG ACGAGATAGG TTCTGATATA
GGCGTAAAAA CTTATTTAGA AGTTGGTGTT AATCCATATG TTAGAGAAGA AATAAAGTTG
TTAAAAGCTC AAATTGAAAT AGACAAAAGC AGCATCCAAA AATTGTTGAA TACATTAAAA
CAATATAAAG AACTTAAAGA TAAAAAAGTG CAAATTCCAC CCGAAAGAGA AAAACAATTT
TCAAAAGCCG CAAAAACACT CATCAACTTA AGAGAGCAAC TTGAAAAAAA TATAGTGAAA
CTTCACGAAT TGGAAGACAC AATTTCAAAA ATCACTTTCG ACTCAAAGAT AATTGCTAGG
AAATTATTGC ATGCTGGTGT AGAGGTATTA ATACATAATG CAAGGTTTTA TCCAACAGTT
GATTTACCAA AAGCTGTCCT TAAATTTGAA AATGGTCAAA TTGTAGCTGG TGGGTATAGT
GAAAAATGA
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| Protein sequence | MDINITVSSD KMEAYLTVNS VFPDETITLE SLIEEIRNAK IVHGIDYDAL RSFCQNPTIG
VQLLFAHGDK PKDGEDGRVV FEFKETSSAQ TILSGNKVDF REFPVQKRII VKKGQKIASI
FPPTEGIPGR NVYGEPVPAK KGNEAKIVLG KNVSLSEDGR HIISTTDGIL KVDPEKNIIE
VSEYLEIEGD VDYSTGNIDF PGSVFVKGDV KPGFVIRAKG DIEINGVVEA SSIISLEGNV
KISGAKGKDK GLIKAKKDVY LKYAESTTIE CENLFFEHEL LNCTVRVTNS IIGKGRNSSI
IGGEYIASNL IEADEIGSDI GVKTYLEVGV NPYVREEIKL LKAQIEIDKS SIQKLLNTLK
QYKELKDKKV QIPPEREKQF SKAAKTLINL REQLEKNIVK LHELEDTISK ITFDSKIIAR
KLLHAGVEVL IHNARFYPTV DLPKAVLKFE NGQIVAGGYS EK
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