| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0879 |
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| Symbol | |
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| ID | 5453018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 951988 |
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| End bp | 954699 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640874639 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001410388 |
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| Protein GI | 154249563 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTACAA GAAAAATATG CGAATCATTA GTAAAAATTT TCGAAGTAGA TAAGAATATC
CCAGAGATAA ATGAAATCGC AGATGAAATC GCACAATTTG TAGGTGTAAA CAAAATATCG
ATTGCCATAT ACGAAGAGAA TAAATCACTT TTTAGAGTAC TTTTCACAAA TCTTCTTCCA
GCCTATTCAA AAATCCCCTA CAGTCTTGTT GACGAAAGAG ATTCATTTTC TAAAACATCC
ATAATGGATC TCGACAACCT ATACCTTTAC AAATTGAAAA ATACGAATTC AGGAAAAATC
ATTGGCCTTG TTTTAACTGA TAGCATCCCA TCGAAAATGC CAAATTTTAA TGAACTTAGT
GACTTTTTAT CGTTTGTCCT AAACTTTATA CCAGGATACG AGAAATCGAA AAAATATCTT
GAAAAATACA GGTCACTATG GATGTTAACA AATATATTTG AAGGCAGCGA ATCAGTTGAT
GAATTAATTG AAAGTTTTTT GAAGGTGATG ACCCAAATAT TAGACGCCGA AGTATCATAT
ATAATTAATT TTCCTAAGGA TAGAAACACG AACAGTAAAA TAAATGTTAA AAAGTTCCAA
TACTCTAATG ATATTATCGA AAAATTTGAA TTGGATTTTT CTGATTTAGA TGAGAATGTC
TACAGATATT TTAAGGGTTC AGAAAAAATT ATCTACAAAC CTATCGGTTT GGAGCATATA
CTTAAAATTG ACAACGTTCT CTCTGTTCTT ATATTTAACT CTCAAATTGG TTTATTTATC
TTTGCAAATA AGAAAGAACC AAAATCTTAT GCGCTTTATA AAGCTTTTGA CTCAATGGAT
CTTGAAATAG CTAAAGATTC TATAAACAGA TTATTCCTTG CTAAAGGGAG AATAGAATTT
GAAAAGAGGT TAAAAGAGGA ATTAGATAAA CTTCGCCAAT TACAGGCAAA TTATGAAACA
CTTATAGAAG AACAGAAAGA GCAAATAAGA AAGATGAATG CCGTTCACTA TATAAGTCAG
GCAATTAGAA CAATGTACAG CGTAAAAAAT GTATATAAGA CTCTACTGCT CGGTTTAACT
TCTGGCAGAC TTCTTGGATA TAACCGTGCT TTATTTCTGG CTTACGATGA AAAAAAAGAC
ATACTCGTAG GAAAAATGTG GCTTGGTCCT GAAAGCGAAA GTGTAGAAGA CGATTGGCGG
AAGGCTAATC AACGTGCTAT GAGGTATTCT GATGTAGTAC AGTACCTTAG AGAAGAATCA
ATGCTTTTAG AATTTGATAA CAAATTAACT AAAATGATAG AAGGTAAAGT TTTTCCATAT
AAAGCCCACC CAATCCTTGA AAAAAGCGTG TTAAGGAAGA AAATATTTGT TGCAAATGAA
AAAATAATAA ACACAATGGG GATGGAAGCA ATAGATCTTG TAAATTTACT TGGAACAAAA
GAATTTGCGG TTATACCTCT TGCTGGAAGA GAAGAAACAT TTGGTGTAAT AATCGTAGAT
AATTATCACA CGAAAAAGCC CATAAAAGAA AATGATGTAG AAATATTAAA AATACTCTCT
GACAGTGCAA GCTTGGCTGT AGAAACAGCT ATAAACTATG AAGATCTGAG AAACAAAACT
TTATCCCTTG AACGCCAAAA AAGTTTAATA GAGTACTTAC GAGAATTTTC AGATTCAGTG
CTTCAAAACA TGTCATCTGC GATAATCGTA CTAGACCGGG AAGGAAAAAT AACAGAGTGG
AACAAAAAAG CGGAAATTTA CTTTGGAAGG CCAAAAGAAC AAATGACCGG AATTGATCTA
AAATTACTCG GAACAGAATT TGAAGACATC GAAGAAATGG CATTCCAAAG CATGAAAATA
AAAGAAGAAA TAACCCTAAG TAATTATTTA ATACAAATAG GTGGTATGGA GAGATTTTAC
GATATAAGAA TAACTCCATT TTGGGATACC GAAAAAATCA TGTTAAGAGG TGTAATAATT
ACTCTTGATG ACGTTACAGA TAGAGTGAAT CTCGAGAAGG AAAGGAAGAA ACAAGAAAAG
CTTGCCGCAC TTGGTGAAAT GGCAGCACGT GTTGCCCATG AACTTAGAAA TCCAATCTCT
GTGCTTGGTG GATTTATAAA AAGACTTGAA AAAAACATTG ATAATCCAGA GTCAGGTAAG
AAATATGTTA ATATAATTAA AGAAGAAATA TTGAGACTTG AGCAGATAGT AAATGAAATA
TTAGATTTTA GTCGTGAACC TAGAGCTTTG GAGTTTACAA CATTCAATAT AAACAAACTT
ATCAACGATG TATACATATT GCATGAAGAC AAAATACGCG AAAAGAACAT ATTGTTTTCA
CTCGAAACTG AATCGGAAGA AATCATCGTT TACGCCGAAT ATTCCAGAAT AAAGCAGGTA
ATTATTAACC TTCTTCAAAA TGCAATTGAA GCTACGCCAA ATAATGGTAA AATATTAGTG
GAAACAAAAA CAAAATTTGA TAGAGTTGTT GTGTCTGTAT GGAACGAGGG TACACCTATC
GATAAGGATA CCGCCGATAA ACTTTTTACA CCTTTCTTTA CAACCAAGGT TCACGGAACG
GGTTTAGGAT TGGCAATATG CAAAAAAATA GTTGAAGATG AGCATAAAGG TAAAATTTAT
CATGAAGCTA CAGAAGATGG TAATAGATTT ACGATAGAAA TCCCAAAAGA AATGCCTAAA
GAAATTTCTT AA
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| Protein sequence | MITRKICESL VKIFEVDKNI PEINEIADEI AQFVGVNKIS IAIYEENKSL FRVLFTNLLP
AYSKIPYSLV DERDSFSKTS IMDLDNLYLY KLKNTNSGKI IGLVLTDSIP SKMPNFNELS
DFLSFVLNFI PGYEKSKKYL EKYRSLWMLT NIFEGSESVD ELIESFLKVM TQILDAEVSY
IINFPKDRNT NSKINVKKFQ YSNDIIEKFE LDFSDLDENV YRYFKGSEKI IYKPIGLEHI
LKIDNVLSVL IFNSQIGLFI FANKKEPKSY ALYKAFDSMD LEIAKDSINR LFLAKGRIEF
EKRLKEELDK LRQLQANYET LIEEQKEQIR KMNAVHYISQ AIRTMYSVKN VYKTLLLGLT
SGRLLGYNRA LFLAYDEKKD ILVGKMWLGP ESESVEDDWR KANQRAMRYS DVVQYLREES
MLLEFDNKLT KMIEGKVFPY KAHPILEKSV LRKKIFVANE KIINTMGMEA IDLVNLLGTK
EFAVIPLAGR EETFGVIIVD NYHTKKPIKE NDVEILKILS DSASLAVETA INYEDLRNKT
LSLERQKSLI EYLREFSDSV LQNMSSAIIV LDREGKITEW NKKAEIYFGR PKEQMTGIDL
KLLGTEFEDI EEMAFQSMKI KEEITLSNYL IQIGGMERFY DIRITPFWDT EKIMLRGVII
TLDDVTDRVN LEKERKKQEK LAALGEMAAR VAHELRNPIS VLGGFIKRLE KNIDNPESGK
KYVNIIKEEI LRLEQIVNEI LDFSREPRAL EFTTFNINKL INDVYILHED KIREKNILFS
LETESEEIIV YAEYSRIKQV IINLLQNAIE ATPNNGKILV ETKTKFDRVV VSVWNEGTPI
DKDTADKLFT PFFTTKVHGT GLGLAICKKI VEDEHKGKIY HEATEDGNRF TIEIPKEMPK
EIS
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