| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0772 |
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| Symbol | |
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| ID | 5452801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 846274 |
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| End bp | 848616 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874522 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_001410282 |
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| Protein GI | 154249457 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0538889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACGCA GTGAGTTTCA TGTTCTTATT TCCGAACGTG TGCTCTTCTT AGATGGTGCT
TATGGCACTG AATTTTTTAA GCGAGGGTAC ATAAAGGGTA AAGAACCAAT TGAAATATTG
AATGTTAAAG CTCCGGAAAA GGTATTAGAG CTTCAAAGCG AGTATGTTAA AGCTGGTGTA
GATTTTCTAC TCACGAATAC GTTCAGTGGT AATAGGCACA AATTAAAAAA ACTTGGATAC
GAAAATTATT TTGAGCAGAT AAATTCAGAA GCCGTTAGGA TCGCTAAAGA AGCTGCTAAA
CATTCTGAAA AGAAGGTATA TATATTAGGC GATATGTCTT CTGTTGGTGA GATGATTCAA
CCAATAGGCG ATTTGGATTC AAAGTATGTT TATAACATAT TCAAAGAACA AGCGAAAGTG
CTTATAGAAT CCGGTGTTGA TGGGATAATA ATTGAGACAA TGAGCGATTT GAAGGAACTT
AAACTCGCTT ACTTGGCGGT AAGGGATGTT TCAGAAGATA TCCCATTGTT CGTAAGTATG
ACGTTTGAAG AAAATAGCGT TGCTGTTACA GGGACAAGCT TAGAAGTATA CGTTTCTTTG
TTTAACGATC TTGATGTAGA TGCGATTGGT ATAAACTGTA CATTAACGCC AGATAAGATG
GTTCCTCTTG TAAAAAAGTT GTCTATCTTT TCAAAAAAGC CTATATTTGC CGAACCTAAT
GCTGGAAAGC CAACTCTATC AGCCGATGGA CGGTTAATTT ACAAAACTAC GCCAGAAGAG
TTCACAGTTT ACATAGAAGA TTATGTAGAA CTTGGCGCAA ATATCGTTGG CGGTTGTTGT
GGTACAGGTC CTGACCATAT TAGATATATG ACAAAGCTTA TAGGTGAAAG AAAACCTAAA
GCACGGAAAA CAGAAGAACT TAACGTGATA ACAAACAGAA CATACATGGT TGAAGTCTCT
CCGTTCCTCG TAATTGGTGA AAGGATAAAC GCTGCCGCCA AAAAGAAGTT GCATGCTCAA
ATTAGAGAGT TTAATTTTGA AAATGTATTG AAATTGGCAA AGGACCAAGA AAAGGAAGGC
GCACAAGTTC TTGATGTTAA TTTAGGTTTG GAAAGTGTAT TGAGTGATGA ACATTTTAGA
AGAATTATTG TGGAACTAGA CAGGATTGTA AGTCTTCCTT TATCTTTAGA TATACAATTC
AACGAATACC TCGAAGTTGC GTTGTTTGAA TATCCAGGAA GGGCTATTAT AAATTCAGCA
AAAGCTATCA AGGAAGATTT GGATGCTAAG ATACGGATGC TTAAAAGATA CGGTGGAATA
TTGATTATCC TTGCGATGGG AAAGGAAATA CCAAATAGTC CTGAGGAGAG ATACAAAACA
GCGAAGGACG CTGTTGAATA CGCAGAAAAG AATGGAATAG ATCGTTCGAG AATCTTCGTC
GATCCATTAG TTTTACCACT TGGGGCAAAT CAAGATTACA ATGTGACGCT TGAAACGATA
AAGTTACTTA ATAAGGAAGG TATCAAAACA AGTATAGGGT TATCAAATTT CAGTTTTGGT
ATGCCAAATA GGGAACAACT CAACGCTTCT TTCTTGGCAC TTGCAATGCA CTACGGCTTG
TCTGGAGCAA TATTGAATAC ATCTGAAGTG ACGACTGTAA ACATACTAAG TGGAATGAAA
AAGATACTAA AAAAAGAATC AACAAATGTA AGTGTAGAGG ACGTAGATAA TGATTTGGCA
AAATTACTTT TAGCTGGTGA TGGTGTAAAT GCTGAGAAAC AAATAATGGC GTATCTTGAT
TCAATGAAAC CAATAGAAGT AGCTCAAAAT GTTCTTACAA AGTCGATGGA AGTAATAGGA
AATCTTTACG CGCAAAATAA GATATTTTTA CCACATTTGA TATTAGCGGC TGAAACGGTA
AAACCAATAT TTAATAAGCT ATTGTCTATG ATAGAAGAGA AAGATTCGGC AAAACTCGGA
AGAGTTTTAC TTGCAACTGT TGAAGGTGAT ATACACGATA TAGGGAAGAA AATTGTTGCA
ACGGTGCTTG AAAGTGCAGG TTTTGAGGTT ATAGATATAG GTAAAGACGT TCCTGCGAAA
GCAATTCTCG AAAAAGTCAA AGAGTTTAAC CCAGATATCG TTGGATTATC TGCTATGATG
ACAACAACTG TCGTACAAGT TGGTGAAGTT GTAAAAACAC TAAGAAATAA CGGTGTTACA
GTACCTGTAA TAGCCGGTGG TGCATCGATG AACGAAGATC TTGCCAAACG ATTTGGCAGT
TTGTATGCCA AAGACGCGCA ACAAGCTGTC GAAATATGCA AAGAGTTAGT ATCAAAGACT
TAA
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| Protein sequence | MTRSEFHVLI SERVLFLDGA YGTEFFKRGY IKGKEPIEIL NVKAPEKVLE LQSEYVKAGV
DFLLTNTFSG NRHKLKKLGY ENYFEQINSE AVRIAKEAAK HSEKKVYILG DMSSVGEMIQ
PIGDLDSKYV YNIFKEQAKV LIESGVDGII IETMSDLKEL KLAYLAVRDV SEDIPLFVSM
TFEENSVAVT GTSLEVYVSL FNDLDVDAIG INCTLTPDKM VPLVKKLSIF SKKPIFAEPN
AGKPTLSADG RLIYKTTPEE FTVYIEDYVE LGANIVGGCC GTGPDHIRYM TKLIGERKPK
ARKTEELNVI TNRTYMVEVS PFLVIGERIN AAAKKKLHAQ IREFNFENVL KLAKDQEKEG
AQVLDVNLGL ESVLSDEHFR RIIVELDRIV SLPLSLDIQF NEYLEVALFE YPGRAIINSA
KAIKEDLDAK IRMLKRYGGI LIILAMGKEI PNSPEERYKT AKDAVEYAEK NGIDRSRIFV
DPLVLPLGAN QDYNVTLETI KLLNKEGIKT SIGLSNFSFG MPNREQLNAS FLALAMHYGL
SGAILNTSEV TTVNILSGMK KILKKESTNV SVEDVDNDLA KLLLAGDGVN AEKQIMAYLD
SMKPIEVAQN VLTKSMEVIG NLYAQNKIFL PHLILAAETV KPIFNKLLSM IEEKDSAKLG
RVLLATVEGD IHDIGKKIVA TVLESAGFEV IDIGKDVPAK AILEKVKEFN PDIVGLSAMM
TTTVVQVGEV VKTLRNNGVT VPVIAGGASM NEDLAKRFGS LYAKDAQQAV EICKELVSKT
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