Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0743 |
Symbol | |
ID | 5452151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 805691 |
End bp | 807055 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640874490 |
Product | MATE efflux family protein |
Protein accession | YP_001410255 |
Protein GI | 154249430 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000193663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATC GAAATATAGA ATTGCTGCTC GGAGATTACA GGAAAGCCAT TGTAAAGTTA TCTATTCCAA ATATGATTTC CATGTTTGTC CAGACAATAT ATAACCTTGT TGACGCTATA TGGGTTGCCG GACTTGGAGC TGTTACACTT GCAGCTATGG GATTTTTCTT CCCAATCTTT ATGATTGTTG TTTCGATCGC GACGGGAATA ACTGTTGGAA CAAGTTCGGC TATTTCCAGA AAGATAGGTG AGAAGGATTA CGAAGGTGCA AATTCCGTAG CGGAACATTC GATCTTACTT TCGCTGATTG TTTCACTTTT TACAGTTTTA ATAGGTATCA CAACGTTGAT ACCTGTTCTT AAAGGTATTG GCGCGAGTGG TGAAGCGCTT CAGAAAGCAT ATGATTATGG GTTTATAATT TTTTTGTTTA CACCATTTCT AATGTTTAAC AACACCGCTG TAGGAATATT ACGTGGTGAA GGTGATTCTA AAAGACCTAT GTATGCTGTA ACCTTTAGTT CTATATTGAA CATCTTTTTG GATCCTATTT TTATATACAC ATTTAAATTG GGAATTAAAG GTGCTGCATG GGCAACTGGA ATATCTATTA TATCAGCAAC GGTTATATTT ATCTATTATT TATTCTTTTC TGATAAAACT TTTTTAAAGG TCTCTTTGAA GAAGTTTAGA TACAATGGTA AATATCTGCG AGATATTTCC ATAGTTGGTT TTCCAACGGC GTTGGCTCAA ATAGCGATGT CAATTGCAAT TTACGTTTTG AATAGATTTG CTGTGAAGGC TGGAGGGGAT GTTGGAGTTG CGACTTTTAC AGGGGCATGG AGGATAATAA ACCTTGGTAC GTTGACTATT ATAGGTATTT CTTCTGCTGT AACACCCGTT ACAGGTGCTG CTTATGGTGC TAGAAATGTA AAAAGGATAG AAGACGCGCT AAATTATGCT ATAAAATTTG CGGAGATTTT TAGTTTAACC ATAATGTTAG GAATATTCAT CTTCTCAAAG CAGTTAGCAT TTCTTTTTGC GTACTCAAAA GCCTCTAGTG AGTTACTTGA AAATATTTCT CAAGCATTAA AAATTTTGTG TTTATTCTTG CCCGGTACTC CTCTTGGAAT GCTCACATCT GGAATGTTCC AGGGAATTGG TCAAGGTTTT AAAAGTCTTG TGGCGACTAT TCTTAGAACT ATCATATTCC AATTATTTTG GACATGGCTA TTTGTCGATG TTATAAAAAT AGGTTTGGTT GGGGTTTGGT GGGGAATAGT TATCGGAAAT GCAAGTGCGT CGTTGGTTAC ATATACATGG GGCAAGTTGT CGATCCAGAA ATTGTACGAG GAGTTTCAAG AATAA
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Protein sequence | MNNRNIELLL GDYRKAIVKL SIPNMISMFV QTIYNLVDAI WVAGLGAVTL AAMGFFFPIF MIVVSIATGI TVGTSSAISR KIGEKDYEGA NSVAEHSILL SLIVSLFTVL IGITTLIPVL KGIGASGEAL QKAYDYGFII FLFTPFLMFN NTAVGILRGE GDSKRPMYAV TFSSILNIFL DPIFIYTFKL GIKGAAWATG ISIISATVIF IYYLFFSDKT FLKVSLKKFR YNGKYLRDIS IVGFPTALAQ IAMSIAIYVL NRFAVKAGGD VGVATFTGAW RIINLGTLTI IGISSAVTPV TGAAYGARNV KRIEDALNYA IKFAEIFSLT IMLGIFIFSK QLAFLFAYSK ASSELLENIS QALKILCLFL PGTPLGMLTS GMFQGIGQGF KSLVATILRT IIFQLFWTWL FVDVIKIGLV GVWWGIVIGN ASASLVTYTW GKLSIQKLYE EFQE
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