Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0729 |
Symbol | |
ID | 5451538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 792634 |
End bp | 793566 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640874475 |
Product | band 7 protein |
Protein accession | YP_001410241 |
Protein GI | 154249416 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATTG TATTAATTGC TATTGCTTTC TTGTTACTAA TAATCGCGGC AACAGGTATA AGGATAGTTA GACCATACGA AAGAGGCCTT ATAGAAAGAC TTGGTAAATT CAGAAAGGAA GTTCGTGCAG GTCTTAATTT TATCATTCCT TTCTTCGATA GAATGATAAA AGTAGACATG AGAGAACACG TTATCGATGT TCCACCTCAA GAAGTCATCA CAAAAGATAA CGTTGTTGTC GTTGTTGATG CGGTTATCTA TTACGAAGTT ACAGACGCAT TTAAATCTGT CTATAACGTA AACAACTTCG AATTTGCGAC AATTAAGCTT GCTCAAACGA ATTTAAGAAA CGTCATAGGT GAACTTGAAC TTGACCAAAC ACTTACATCA AGGGAAAGTA TTAACACAAA ATTGAGAACT GTACTTGATG AAGCCACAGA TAAATGGGGT ATAAGAATAA CAAGGGTAGA AATAAAAAAG ATTGACCCAC CAAAGGACAT TATGGAAGCT ATGAGTAAAC AGATGAAGGC AGAAAGAACC AAACGTGCTG CAATTCTTGA GGCTGAGGGT ATAAGACAAT CCGAAATTCT AAAAGCAGAG GGTGAAAAAC AAGCCGCTAT TTTGAAGGCC GAAGGTGAAG CTGAAGCTAT TAAGAGAGTT GCTGAAGCTA ACAAATACAG ACTTATCGCT GAAGCAGAAG GTCAGGCATT GGCTATTGCA AATGTATTCA AAGCCATCCA TGAGGGTAAT CCAACAAATG ACCTTATCGC AATTAAATAC CTTGAAGCAC TTAGAGATAT AGCAAATGGC CAGGCAACCA AGATATTCCT CCCGCTTGAA ACATCCTCTG TTCTTGCTTC AGTTGGTGCT ATGGCGGAAT TGTTTAAAGA CAAATCAGAA AAAACAAATC AGATGGGAGA GCAGAAAAAA TAA
|
Protein sequence | MYIVLIAIAF LLLIIAATGI RIVRPYERGL IERLGKFRKE VRAGLNFIIP FFDRMIKVDM REHVIDVPPQ EVITKDNVVV VVDAVIYYEV TDAFKSVYNV NNFEFATIKL AQTNLRNVIG ELELDQTLTS RESINTKLRT VLDEATDKWG IRITRVEIKK IDPPKDIMEA MSKQMKAERT KRAAILEAEG IRQSEILKAE GEKQAAILKA EGEAEAIKRV AEANKYRLIA EAEGQALAIA NVFKAIHEGN PTNDLIAIKY LEALRDIANG QATKIFLPLE TSSVLASVGA MAELFKDKSE KTNQMGEQKK
|
| |