| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0639 |
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| Symbol | ushA |
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| ID | 5451537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 702196 |
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| End bp | 703725 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640874380 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001410151 |
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| Protein GI | 154249326 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.38757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TTCTGATAGT TCTTTTGTTA GTTCTTTTGA GCTTATTTGC ATTTGCGGTT
AAGATTACTG TTTTCCACAT TAACGACACC CACGGTCACG CATGGTCATT TACAGATTCT
GCAGGTAATA TAATCGGTGG ATTTGCAACG GTTGCATCTA TTATCGATGC AGAAAGAAGT
GTCAATCCTA ACGTAATTTT CTTACATGCT GGCGATATCA ACACAGGTGT TCCTGAGTCA
GACTTAATGA ACGCTATACC GGATATATTT GCACTTAACA GAATGAGATT GGCAGCTGCA
ACAGTTGGCA ACCATGAATT TGATAAACCA AGAGATGTGT TAATGAAACA AATATCATGG
GCAAAATTCC CATTCTTAAG TGCAAATATC TATAAAGATG GAAAGCCACT CTTTACGCCT
TATATCATAA AGGAAGTTGG CGGGGTTAAG GTAGCAATCG TTGGTTTCAC AACAGAACAC
ACGAAGATAT TGGAGGGACC AAACTCTGAA GATCTCGAAT TTAAAAATGT TATAGAAGTT
GCTAAACAAT TAATTCCTGA ATTGAAAAAA CAAGCAAATG TTGTTATTGC TTTAACGCAC
CTCGGTGTTG GACAAGGTTA CTCTGAACTT TACACAACAG CCGATCAACT TGCGAAAGAA
GTTGAAGGAA TTGATTTAAT TATCGATGGT CACAGCCACA CTCAAATGAC ACAACCGATG
GTTGTAAATG GTGTACCAAT TGTTCAAGCG TTTGAATGGG CAAAGGTATT GGGAAGAGCT
GATATCGAAG TTGAAAATGG AAAAGTTGTA AAAATAGACT GGCAAGCTAT ACCGGTAATT
CAATCAAAAG TTGTTGGAAA AGATGAATCA GGGAAGAATA TCTACCAAGT TGTTACAAAA
GAAGCTTTGT ACGTTAAGAC ACCGCTCGAT TACTTCAAAA AACTCGGTGG TGCAAAACTT
GACACAGTTA TAGGAACAAC AGAGATATTA TTAGACGGTG AAAGAGCAAA CGTTAGATCA
AAAACAACAA ACCTTGCAAA CCTTATAGCT GATTCCATGA TTTGGAAAAC GGGTGCTGAT
GTTGCTTTGA CAAACGGTGG AGGAATTAGA GCATCAATAA AACAAGGTAA TATAACAATA
AGAGACGTGC TTACGGTTCT TCCATTTGGA AACACTCTCT ATGTGCTTGA AATGAAAGGT
TCTGACTTAA TAAAGGTATT TGAATATGCT GCAACTGTAC CAAATGGCCA AGGTGCGTTC
CTACAAGTTG CTGGCGCAAC ATGGAAATCA GAAAGTGGAA AATTAACAGA AGTGCTTGTT
GGTGGGAAAC CAATAGACCC AGAAAAAGTC TATAAAGTTG TTACAAATGA CTATATGGCA
GCTGGTGGAG ACGGTTACTC CATGTTGAAA GGTCAAAAAG GTTACAACAC ATTCTACGTA
ATGGCAGATG TTGTTGTTGA GTATATCCAA AAAGCGTTGG GTGGAAAAAT AACATCTTAC
GATGACAAAC CAAGAGTGGA AAGAAAGTAA
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| Protein sequence | MKKFLIVLLL VLLSLFAFAV KITVFHINDT HGHAWSFTDS AGNIIGGFAT VASIIDAERS
VNPNVIFLHA GDINTGVPES DLMNAIPDIF ALNRMRLAAA TVGNHEFDKP RDVLMKQISW
AKFPFLSANI YKDGKPLFTP YIIKEVGGVK VAIVGFTTEH TKILEGPNSE DLEFKNVIEV
AKQLIPELKK QANVVIALTH LGVGQGYSEL YTTADQLAKE VEGIDLIIDG HSHTQMTQPM
VVNGVPIVQA FEWAKVLGRA DIEVENGKVV KIDWQAIPVI QSKVVGKDES GKNIYQVVTK
EALYVKTPLD YFKKLGGAKL DTVIGTTEIL LDGERANVRS KTTNLANLIA DSMIWKTGAD
VALTNGGGIR ASIKQGNITI RDVLTVLPFG NTLYVLEMKG SDLIKVFEYA ATVPNGQGAF
LQVAGATWKS ESGKLTEVLV GGKPIDPEKV YKVVTNDYMA AGGDGYSMLK GQKGYNTFYV
MADVVVEYIQ KALGGKITSY DDKPRVERK
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