Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0519 |
Symbol | |
ID | 5451613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 572175 |
End bp | 575567 |
Gene Length | 3393 bp |
Protein Length | 1130 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640874268 |
Product | UvrD/REP helicase |
Protein accession | YP_001410039 |
Protein GI | 154249214 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAATC TTGGAAAGTC CGTTGCAGAT ATAGTTAGAG AAAATCCAAA TTGCAATTAT TTCATCTCAG CATCTGCTGG GACAGGTAAA ACTTACACTT TGACGAACTA TTACATGGGG ATTTTGGAAT ACTACGAAAA GGAGAATAAT CCAGATATAG TCGATGGTAT TTTGGCAGTG ACGTTTACTA ACAAAGCCGC AAACGAAATG AAAGAAAGGA TAATGAATAA AGTCAGAGAA AAGATTACAT CTTCATCAGT CAGTAACTTG GCTTATTGGA AACGTGTTTA TTCCAATATG TCCAGAGCGG TTATCTCAAC AATCGACAGT TTTTGCAGAA GAGTGTTGAT TGAGCAAAAT ATCTACGCTG GTGTCGACCC GAATTTTACA ATTATCAACG ATTTAAAACA ATTGAAAATC ATCGATAGCG CCTCACGGCA GGCTATGGAA ATCGCTTTTA AGGTGTACGA AGATTTGGAA ATTCCGCTCT CCCCAATGCT TTCAAGCGAA AGAAGGAAAA GAATAGAAGG ATATATAAAA GAATTGAAAG AAATAAAGGA TTCCATTATC GACCTTTTTG AATTAGTTGG AGATGTTTGG AGAGTGAAAG GTTTTGTTGA GGATATAGTT ACAAACTGGA GGCTTGAGCT TAGACAGTCC AACGTTAGTA AATTACTACT GGATGTGATG AAAAAAGCAG GTAATTCTTT TAGAGTTTTG AGGCTCATTA GTTTAATTGC CTCAGAGCTT TACGAAGCAG AGACAATTGA TAACTTTGAA TACGATTTCA AAGGCGTACT GGAAAAGACT ATCGAAGTTT TGAATAATAA TGAAGAAGTT AGAAAATATT ATCAAGAGAG GTTCAAATAT ATCATAGTTG ATGAGTTCCA AGACACAAAT GAACTCCAGC GCATGATATT TGATTTTATC CACACGGACA AAAATTACAT ATTCTATGTC GGAGATAGGA AACAGTCGAT ATACAGATTC AGGGGCGCTG ATGTTTCTGT TTTTGTAAAG ACGATGGATG AATTTGAGAA AAGGGCAAAG ATTTCACCTG ATAAATACAG GATACTTTCG CTCCAAACTA ATTACAGATC GCATGAATTT CTCGTTGATT ATTTTAACAA AGTTTCGAGG GATTCTATAT TTAGAAATGA AATCTACGAT ATGCTTTCTA ATTTAAATGG TTTTAATTCT AATAAGCCGA TATCTGAAAT ATCCGATGAT GAAGCAAAAC TTTATCTGCA CGAAGCTTTT AGGTTGCGCT ATCGGGACTT GTACGATAAA CTTTGGTTCT TAGATGAAGA CATTTCAAAT GCACATATTA AAAAGTTAGA AAGTGAAGTT ATTCCACAGA TTGATTTTCT CAACGAGAGC ATAAGTAGGG TTTCCTACTT AAGTATAGTA TCACTCGATG AAAAAGTTTC TCCCGAAGAC GAGGCAAATT TGGTTGCAAT GGCTATTAAA AATTTAGTTG GCAAGGAGAT TACTATTTTC GATAAAGAGA AGAATGATTA CGTAACAAGA AAAGTGGAGT ACAAAGACAT AGCTATCTTA AGTTACAAAT TAGCGGGTAT TGAATCGATA TACAGAGAAA CTTTTGGTAA ATTCAATATC CCACTTTATG TTGTAAAAGG GCGAGGATTT TACAAACGCC CTGAAATAAG AGCAGTTATT TCCGCGCTTT CCGTGATTCA AAATCCTAAC AATGACTATA ACTTCGTTGA ATTTTTCCTT ACGCCTTTTG TCGAATCAAC AGATTTCTCA CCATCTTTCG ACAAATTCAA AATATTGCAC AAAATAGTTT TAAACGCAAG AAAATTAAGG GAAAACGGTG AGAGAATATC ATTCTTCCAA TCAGCTAAAA AACTTGGCAA AGAAGATTTG CCAGACTACG TTTCCGAAAT GATCGAACTT GTGCAAAAGT ACGATGAATT GAAATACTTT TTAAGACCAG CCGAGGTTTT GAAAGGATTC ATCAACGAGA GTTATTACTT AGCTAAACTT TCGAAATTTC CAAACAGTGT CCAAAGATTG AAAAACGTTA AGAAATTGCT TGACCAAGCT ACGGAATTTA ACCAACAGGC GTCGACATTC TCCGAGCTAA TAAGATTGCT TTCAAAAGTG GAGGAATTAC AAGAGACCGA GGCTTCCGAA GTTTCCGAAG AAGACAACGT CGTTAAGATG ATGACAGTGC ATGCTTCAAA AGGACTTGAG TACAACATAG TTTTCCTTGT TAACAATAAT TTTAATGAGA TGGAATCTGA TGAGGTATTC TTCCCATCGG ATGACAATGG AGGAAGGTAT ATTCATATCA AAAGGTTCAT AGAGAATTAT AAGGATAAGT TTAATATAAA CAAGGATGAG TATAAGAAAT TAAAGGGAGA ATTGGAAGCA GAGTTAATAT ACGATGAGAC TGAGATACTG CGAAAGATAT ACGTGGCTAT AACCAGGGCA AAAGAGATGT TATTTGTGGT AACGTACAAT ACTAATAGCT CTAGGGGGAA AAGAGGAAAA ACTGCTGGAC AATACCTTGC ACATAATGAG TTTAAAACTA TTACAATAGA CAAAAAGCAA ATCGATGAAA TGGTAAAATC GCTGAGTATT TCTGAATTTT CAGGGGAAGA GAATAAAAAA TTGCTAGACG AGGAAAAGAT AAGAAAACAG ATAGAAGATT TTTCGAATAT TGGGTACAAA AGGTACATAT CACCAACTCT TTTGTACAAC ATTACAGATG AGAAGAGTGA TAAAGAGTTG GTTAACGAAC TAGAGGTCGA TTTTGAAGAA AATATGCCTC TTTTCGAAGG TCAAGAAAAA CAAGATATAT TAAAAATTTT CGAAAAAAAT CAAGAAAAAC AAAAGAGAAG TAAAAGTGAG GTAAGTCTAC TTCTATCTTC GTTACTTGAA ACCTCGAGGG AAGTTATCGA AGGGAAGAAT ATACATAGAA GGTTGATGAG TGTTCAAAGA TATCCAGATT TGTTGAATCT TGTCGAAAGA GGAGAGTTGC CCGAGAAGAT ATTGAAAGCG GATGTAATCA AATATCTATT TGAAAACAGT GATAAGGTTA TTTCCGAATG GAGAATCGCA AAATCGGTGG TTATAGATGG TAAGAAATAT ACACTCTTTG GTGTGCCAGA TAGGGTGTTT TTCAAAGATG GAAAGATATA CGTTGTTGAT TTTAAATCAT CGTATCTAAA GGATGGTTCT GAAGAAGTTG AGAAGTACAA ATTCCAGCTC CAATTTTATA TGTACATGCT TAAAGATTTC GGAGAAATTG CTGGAGGGTA TTTAGTCGGC GCAAGAAGTG GGTTCGTTAT TAGAGTTGAA AGACCTGGCG ATGATTTCAT TGAATTACTG GCAAAGCTGA TAAGAAATTT AGAGGTGATA TAG
|
Protein sequence | MQNLGKSVAD IVRENPNCNY FISASAGTGK TYTLTNYYMG ILEYYEKENN PDIVDGILAV TFTNKAANEM KERIMNKVRE KITSSSVSNL AYWKRVYSNM SRAVISTIDS FCRRVLIEQN IYAGVDPNFT IINDLKQLKI IDSASRQAME IAFKVYEDLE IPLSPMLSSE RRKRIEGYIK ELKEIKDSII DLFELVGDVW RVKGFVEDIV TNWRLELRQS NVSKLLLDVM KKAGNSFRVL RLISLIASEL YEAETIDNFE YDFKGVLEKT IEVLNNNEEV RKYYQERFKY IIVDEFQDTN ELQRMIFDFI HTDKNYIFYV GDRKQSIYRF RGADVSVFVK TMDEFEKRAK ISPDKYRILS LQTNYRSHEF LVDYFNKVSR DSIFRNEIYD MLSNLNGFNS NKPISEISDD EAKLYLHEAF RLRYRDLYDK LWFLDEDISN AHIKKLESEV IPQIDFLNES ISRVSYLSIV SLDEKVSPED EANLVAMAIK NLVGKEITIF DKEKNDYVTR KVEYKDIAIL SYKLAGIESI YRETFGKFNI PLYVVKGRGF YKRPEIRAVI SALSVIQNPN NDYNFVEFFL TPFVESTDFS PSFDKFKILH KIVLNARKLR ENGERISFFQ SAKKLGKEDL PDYVSEMIEL VQKYDELKYF LRPAEVLKGF INESYYLAKL SKFPNSVQRL KNVKKLLDQA TEFNQQASTF SELIRLLSKV EELQETEASE VSEEDNVVKM MTVHASKGLE YNIVFLVNNN FNEMESDEVF FPSDDNGGRY IHIKRFIENY KDKFNINKDE YKKLKGELEA ELIYDETEIL RKIYVAITRA KEMLFVVTYN TNSSRGKRGK TAGQYLAHNE FKTITIDKKQ IDEMVKSLSI SEFSGEENKK LLDEEKIRKQ IEDFSNIGYK RYISPTLLYN ITDEKSDKEL VNELEVDFEE NMPLFEGQEK QDILKIFEKN QEKQKRSKSE VSLLLSSLLE TSREVIEGKN IHRRLMSVQR YPDLLNLVER GELPEKILKA DVIKYLFENS DKVISEWRIA KSVVIDGKKY TLFGVPDRVF FKDGKIYVVD FKSSYLKDGS EEVEKYKFQL QFYMYMLKDF GEIAGGYLVG ARSGFVIRVE RPGDDFIELL AKLIRNLEVI
|
| |