| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0515 |
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| Symbol | |
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| ID | 5452139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 561931 |
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| End bp | 565203 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874263 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001410035 |
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| Protein GI | 154249210 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0340666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGTCCA TTCTTGAAGA GATAGTCTGG TACACAACTA TTCCATTGGT AGCGCTTTTT
GCTCATAGGC AGTACACTTA CGAATTCAGT ACACCGAAGT ACGCTATTTT AACTATCGCA
ACCTTTATTT TAGGCTTTTA TTTGCTCTAT CGCCTGTTTA AAAACAAGGA AATTAAATTT
TTCGCAACAC CTGTTCACTT CACTTGGCTT GCTTTTTCTA TAATCGCCTT ACTATCAACG
ATGAACACAT TCCAAGATAA CAGATTTTTC TTCAGACAAG CGATAGACAT AGGTCTTTAC
CTCTTCTTAA ATGTTTTACT TTCGTTTTAT TTTAGTTCAA TCATTAATAA AAAGGAATAT
ATTGTGAGAT TCTTATTTAT ATTCGTTTTA ACAGGTTTAT TTATCGCTAT AAATGCTATT
CTCAATTTTT ACATTGGCTA TGATATTTTA CTTGGAAATG TCGGGGCACC ATTTGAAAGA
GCGAGTATAA AGGCGAATAT AGGTAATGTT ATTTTTGTTT CAAACTATTT GAACATGCTC
CTTCCCATAG CGATATATTT CGTAGCGAGT TTGGATTTTG GATATTTGAA CATCAAAAGG
TTATGGACTG TGTACCTTTT TAAAATAGTA TCATTAATTT CTGCAATCTT GTATTTTGAT
GTTATAGTCT TTTCTCAAAC AAGATCTGAG TATCTTGCGT TGGTGATTGA GTTAATTTTG
TTTGTTTTTG CTTATTTCTT CTATTTAAGA AAGAAAGAAG ACAAAATTGC AGAGGAATTG
AAGAAAAAAG ACCCGAAGAC TTTAAAAAGA TTACTCAGAT TTAGAGAAAT GTCTATTCTA
ATATTTATAT TAATGGCAAT TATTATTGTT GTAGTATACA ACATTCCAAC ACCATTCAAC
AACTACGCAT CATTCAAGAT GACAGATAGA TTCAGTGCCA TGTCTTCTGT TTCAAGTAGG
GATGAAAGAT TTCTCTCGTG GTTCTCAACG ATTTACATTT GGAAAAATCA CAAAATCCTT
GGTCAAGGTA TCGGTACATA CCAGGTATAT GGTTTGTATG GTATTTCAGA TCTAATAGAG
GCTCATCCAG AGTACAATTA CGGTTGGAAT AATTTCAAAA GAGCACACAA CGATTACTTC
CAGGTGCTTT CTGAGACAGG TATTTTAGGT CTTAGTGCCA TAGTTTTAAT GTTAATCTTA
CTTGTAATGT ATGTTGTAAA GAACATTAGA AAAGTTGAAG ATAAAGATGA TGCGATTCTG
TTCTTTATGT TGGTTTTGAG TGGAATTATT TTCGCATTTC AAAGTGTTTT CAGCTTCCCA
GGGCATTTGC TTCCAAATGC GCTACTTGCG AATTTCGTTA TAAGCATCGG ACTTGGAAAG
TACTTCAATA AGGTTAACGG TAAAGAATAC ACAATTAAAG GAGCAAAAGC AATCGCTTTA
GCTATTATTT TGATATCGGT AACCGGTTTG TCTACATATC TTAGATGGAA TCATTTCATA
TCTGAAGTTT ATTTCAGAAA TGGAAACGTT GCATATGCGA CGCTTTCTGA GTTGAGAAAC
AATTTAAGCA AAATTGATGA GTACCTTAAG CAACTTGATA GCATAGAATC TGATTTGAAT
AATTTCACAG GTCAATTTCA AGCACTGTCA CCACAAAATT GGCACAATTT GAAAAAGGCA
GAAGCCCAAA GGCTAAATCT TCAGTATAAC GAATTGCAAG CGGAAAGTGA AAGGCAAAGA
AATATAGAAA ATATAAGAGC TCAAATCAAT GCACAAAGAA ATAATTTGAT TAATCAGAAA
AATTTGTTGC CCCAACAAAT AAATGAGCAG TACAAAATTG CAAAAGAGAA TTTAATAAAG
AGTGTAAAAT TGAATCACAC CTATGGAAAA TCGTACTTTT ATCTTGCGGC ACTAGCGGCA
GACCCAATAA GAGTTGATGA GCTCAAAAAC TTACTCAAAT CAGACCCAGA AAGCGTTTTA
AACCAAAGAG CAGATGAGTA TCAAAAATTA ATCCCAGAAA AGTTTAAGTA CGCTTACTAT
TCAAAATTGG CAGGTTATAT CAAAAATAAT CCGGATTTCT TAAATCAAGT CGATGTTGCA
ACCATTCAAG CTATTATAGA TTCCATAAGC TTGTATGAAC TATCACTTCA AACATTTACA
GAAAGAAATA CTTTTAGATC TCTTGCAATG AGATATAACT CTTTGTATAG TTTAAATAAC
TTTGCCCTTG GAAAAATCAA CGATAGTGAG TTAGAAAAAT TACTAAGTTC TTACTCAAAA
GAATTTTTCA ACAAATATGG CACCTGGGTT AGAAAAACAG TAGACATCAT GCCAGGTGGA
TGGAACAGAT TCCCAGATTG GAAAAACATT GATATAGAGC TTGCAACAAT GTATGGTCAG
GATATATACA GATTCTTCGC GGTTCTCACT GCTCAAACTT TGAATCCTAT CAACGTAGAA
TCAAGAGAAT TGTTAGTAGA TCTTGCCATG AGAGAAATAG AAGCGTGTAA GTATATGGAA
TTGAAAGGTG TATGGGGAGT TCCAGATGGG GTATTCGATT ACCTACATGA ACTTGCTCAT
GAATACCAAA CAGTTGGGGA GTATCAAGAA AGTGTCTATA CATACAATCA GTTAGTAGAT
TGGTATAAAG AAAGTTACGA GTATATATCT AAGAAACTTT CAAATACCTC CTATTGGGAA
AAGACGTTTA ACGACTTTAT CGAAAATAGT AAAAACGAAC TTGACAAAAT ACTTGCTGAT
GATGAAAAAG GATACCTCTC AAATAGCTTA ACACCGATCT TTGTCAATCT GTTGAATAGT
GCTTATAAGG AATTTACATC CATTGATTTT ACCAACATTG AAAAAGATTT CATTGAGGCA
TTATCAAAGA ATCCTTCAGC ATATTGGCCT GGAATAGCAA AAAAAAGCGC TTGGAAAACT
ATTACACAAG CAAAGATGGA CGACTTTTCA AATCAAATAA GTGCATTATC GTTCTCAGAA
GAAGCAAGAC AAGAAATTCA GATTTTGATG AATAACGTTG TCAATTTCTC TGGAGGACTT
TTGTATGAAA GATATAAACG CTTTGTTGCT CACTATGACA TGGTGAAATC GGAATTTCTA
AATACAGTCA ATGGATTGCT CGAAAAATAC AATAAGGCAA GCGAAAAAGA GATAATTTCA
GATTGGGGAG AGATAGCATT CAATTCACCA AAGTATGAAA AGAAAGAGGA TGTAATTAAA
TACCTAGAAG ATATTTTAGC AAAGTACAAA TAA
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| Protein sequence | MLSILEEIVW YTTIPLVALF AHRQYTYEFS TPKYAILTIA TFILGFYLLY RLFKNKEIKF
FATPVHFTWL AFSIIALLST MNTFQDNRFF FRQAIDIGLY LFLNVLLSFY FSSIINKKEY
IVRFLFIFVL TGLFIAINAI LNFYIGYDIL LGNVGAPFER ASIKANIGNV IFVSNYLNML
LPIAIYFVAS LDFGYLNIKR LWTVYLFKIV SLISAILYFD VIVFSQTRSE YLALVIELIL
FVFAYFFYLR KKEDKIAEEL KKKDPKTLKR LLRFREMSIL IFILMAIIIV VVYNIPTPFN
NYASFKMTDR FSAMSSVSSR DERFLSWFST IYIWKNHKIL GQGIGTYQVY GLYGISDLIE
AHPEYNYGWN NFKRAHNDYF QVLSETGILG LSAIVLMLIL LVMYVVKNIR KVEDKDDAIL
FFMLVLSGII FAFQSVFSFP GHLLPNALLA NFVISIGLGK YFNKVNGKEY TIKGAKAIAL
AIILISVTGL STYLRWNHFI SEVYFRNGNV AYATLSELRN NLSKIDEYLK QLDSIESDLN
NFTGQFQALS PQNWHNLKKA EAQRLNLQYN ELQAESERQR NIENIRAQIN AQRNNLINQK
NLLPQQINEQ YKIAKENLIK SVKLNHTYGK SYFYLAALAA DPIRVDELKN LLKSDPESVL
NQRADEYQKL IPEKFKYAYY SKLAGYIKNN PDFLNQVDVA TIQAIIDSIS LYELSLQTFT
ERNTFRSLAM RYNSLYSLNN FALGKINDSE LEKLLSSYSK EFFNKYGTWV RKTVDIMPGG
WNRFPDWKNI DIELATMYGQ DIYRFFAVLT AQTLNPINVE SRELLVDLAM REIEACKYME
LKGVWGVPDG VFDYLHELAH EYQTVGEYQE SVYTYNQLVD WYKESYEYIS KKLSNTSYWE
KTFNDFIENS KNELDKILAD DEKGYLSNSL TPIFVNLLNS AYKEFTSIDF TNIEKDFIEA
LSKNPSAYWP GIAKKSAWKT ITQAKMDDFS NQISALSFSE EARQEIQILM NNVVNFSGGL
LYERYKRFVA HYDMVKSEFL NTVNGLLEKY NKASEKEIIS DWGEIAFNSP KYEKKEDVIK
YLEDILAKYK
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