Gene Fnod_0498 details

Gene Information

• Locus tag: Fnod_0498
• ID: 5452574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 539290
• End bp: 541218
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640874247
• Product: SMC domain-containing protein
• Protein accession: YP_001410019
• Protein GI: 154249194
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG1196] Chromosome segregation ATPases
• TIGRFAM ID: [TIGR03185] DNA sulfur modification protein DndD

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.29132
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGGCTGG AAAAAATTAA ATTGTACAAT TTCAAACAAT ACAGAGACTT TGAAATCGAT 
TTTTCAAAAT TTCCCCAGGA TAATAAAGAC TTCCACGTTA TTGTTGCCAA AATGGGAGTT 
GGTAAAAGCA ACTTACTTGA AGCTATAAAT TGGTGTTTGT ACGGAAAAGA ACTTTTTGGA 
AATATAGCCA AACCAACCGA TCCCAACGTC TTAAGCAACA GTTGCTTGGA CAAAGATGGA 
ACACATACCG TAAGAGTGGT TTTAAACTTA AAAGATACAG ATAAAAACGA ATACTTTATA 
AATCGATATT CTAAATTTAA AGTTAGTGAT AGAAAAGCTA CTTCATTAAA TGAGGTTTAT 
TTAATATTTG GCAAAAACAA CGAACTTGTG AGAAAAGAAT TAGATGCAAA AAAGGAAGTC 
GAAATTTTAA TGCCTGAAGA CCTTAGGGAT CATTTTTTCT TTAATGGTGA AAGATTGGAC 
AACTATTTCG ATAACGTACA GAGTGAAAAA ATTACGAAAG TAATTAAGAA AATGTCAGGA 
CTTGATACTT TAGAAAACTT CAAGGAATTC CTTGAAAAAG TTGAGAACAG ATACATAAAA 
ATGATCAGAG TAAATGAAAA AAGTGAAACT CAAAAAGAAG AATTAGAGAA AAACCTAAAC 
AGAATAAAAG TAGAAAAGAA GGAATCAGAA AAATTACTTG AAAAAACTCG AGGAGATCTT 
GAAGCAACAA AAAAAGAATT ACAAGACGTA GATTTACAAC TAGAAAAACT GAAAGAATAT 
GAAAACATAA AAAAACAAAT AGAACTTTTA CAAAAAAGGT TAAACGATCT AAATAGTACA 
AGAAAAAATA TTCTAAAAGA AAAAGTTCAA ACTGTTTTAG AATTATCAAC ATTGATGTTC 
GGTTGGTTGG CAGTAGAAAA AGTTTACCAA GAAAATTTTG AAATCGACTT TAATTACAAC 
TATTTACCTT CAAATGTAAT AGAAAACGCT CTAAGTGAAA ATAAATGCCC AGTTTGTGGA 
AAAGAATTAG ATGAATTACA CAGAAACCAT TTAAAGTATT TTTCTTCGAA TAAAGAATTC 
GTCATTACTA AGAAAGAATA TATGGAATTA ATAAAAAGTA TAAAAGATTT GGAAATTAAA 
AGAAGAAACT TAAATAATCA ATTGAGTGAC ACACTGCCTA AAATTGAAGA AACCGAGCAG 
GAACTATACA CTGCCGAAGC CAATATATCT CAGACCGCTT CCGAAGAATT AGGCAAATTA 
TACCGCAGAA GAAATGAACT TGAAAGTCAA ATACAACAAC TTAATCAAAG AATAGGACAA 
TTAGACAGTA AAATTGAAAT ACTATCAGAA AAAGAAAAAG AGACAGAAAT GAAAATTTCT 
GAGCTCGCAA TTCAGGACTC TTCAAACATC AATAAAAAAA TAGACTTTGT TAGGAAGATA 
GAACAAATAA TAATAAAAAC TATGCTCAAC AGAAAAAAAG AAATAAGAGA CGAAATCACT 
AGCTACGTGG AAGAATATTT GAGTAAATTA ATGTGGAAAA GAGATCTAAT AAAAAAAGTG 
GAAATCACAG AAAGTTTTTC ATTGAATATC TTTGACAGTT ATGAAAACAT GATTTTAAAC 
CGTCTATCAG GTGGTGAAAG ATCAGTATTG ACGTTATCAT TTGCCCTTGC AATGCATAAA 
GCTGCAGGTG TAAATGCTCC AATAATTATA GACAGACCTT TAGCTAATAT TTCAGGAGAT 
ACATATGACA AATTAATAGA AATGTTTGCA AAAATATCGG AAGAAAAACA GATAATAATA 
ATGCTAACAG ATAAAGAATA CCAACAATCT GCAGAATTGT TGAACAGTCT TGCTAGTACA 
ATACATATTT TAGAAATGAA TGAAACCTCA GAAGTAATAA TCTCTGATAG AATTGCAAAG 
GGAGAGTGA 

 

Protein sequence

MRLEKIKLYN FKQYRDFEID FSKFPQDNKD FHVIVAKMGV GKSNLLEAIN WCLYGKELFG 
NIAKPTDPNV LSNSCLDKDG THTVRVVLNL KDTDKNEYFI NRYSKFKVSD RKATSLNEVY 
LIFGKNNELV RKELDAKKEV EILMPEDLRD HFFFNGERLD NYFDNVQSEK ITKVIKKMSG 
LDTLENFKEF LEKVENRYIK MIRVNEKSET QKEELEKNLN RIKVEKKESE KLLEKTRGDL 
EATKKELQDV DLQLEKLKEY ENIKKQIELL QKRLNDLNST RKNILKEKVQ TVLELSTLMF 
GWLAVEKVYQ ENFEIDFNYN YLPSNVIENA LSENKCPVCG KELDELHRNH LKYFSSNKEF 
VITKKEYMEL IKSIKDLEIK RRNLNNQLSD TLPKIEETEQ ELYTAEANIS QTASEELGKL 
YRRRNELESQ IQQLNQRIGQ LDSKIEILSE KEKETEMKIS ELAIQDSSNI NKKIDFVRKI 
EQIIIKTMLN RKKEIRDEIT SYVEEYLSKL MWKRDLIKKV EITESFSLNI FDSYENMILN 
RLSGGERSVL TLSFALAMHK AAGVNAPIII DRPLANISGD TYDKLIEMFA KISEEKQIII 
MLTDKEYQQS AELLNSLAST IHILEMNETS EVIISDRIAK GE