Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0398 |
Symbol | |
ID | 5451853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 434252 |
End bp | 435121 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640874147 |
Product | riboflavin biosynthesis protein RibF |
Protein accession | YP_001409920 |
Protein GI | 154249095 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00802813 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTATAA CAATTGGGGT TTTTGATGGT GTCCATCGAG GTCACGTAAA GATACTATCA AAATTAAAAG AATGTGCAGA AAGAGAAAAC AGTGATTCTA AAATATACAC CATACTTTAC CCAATGGAGT ACTATACTGG TAATTTCGAT GGGCTTATCA CTTCCGTAGA AGATAGGATC GAATTGCTTT CAATTTACGG TGAACCTGAA ATTCTTGAAT TACCAAAAAT ACAGCATTTA TCACCTGAAG GATTTTTCGA AAAAATTTCC CAAGGTGTCA AAGGAATTGT GGTTGGTCAT GACTTTAAAT TTGGTAAAAA TGGAAGTGGT GATATAAGAC TTTTGGAAAA ATTATGTAAA GACAAAGGAA TTTGTTTAGA AGTAGTTGAG CCTGTAAAAG TTGATAATAT AAGAGTCAGT AGTAGTTATA TAAGGGAACT TTTAAAAAAA GGAGATGTAT TAAAAGCAAA AGATTTTCTA GGGAGAAACT ATTCTATTCA TGGGGTAGTG TATAAAGATA AACAAATAGG CAGAAAATTA GGATTCCCAA CCGCAAATGT AAAGCGCTCT GAGCACTTTT TAATTGACCC TCTTGCAGGT GTTTACCTTG TTAAAGTTTA CGTTCCTGAA CAATTCTACG GATTAATCAA TGTTGGATAT AGACCAACTG TTGAAAAAAC AAAAAAAATA AAATATGAAG TTTACATTTT AGATTTTTCA GCTGATCTTT ATGGTAAAGA AATCCGAGTA GAATTTTTGG AATTTTTAAG ACCAGAATTA AAATTTTCAA ATATCAGTGA ACTCGTAGCA CAGATGCACG AAGATGTAAA AATAGCAAGG AGGATAATCG AAAGGTATGA AAATAAATAA
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Protein sequence | MFITIGVFDG VHRGHVKILS KLKECAEREN SDSKIYTILY PMEYYTGNFD GLITSVEDRI ELLSIYGEPE ILELPKIQHL SPEGFFEKIS QGVKGIVVGH DFKFGKNGSG DIRLLEKLCK DKGICLEVVE PVKVDNIRVS SSYIRELLKK GDVLKAKDFL GRNYSIHGVV YKDKQIGRKL GFPTANVKRS EHFLIDPLAG VYLVKVYVPE QFYGLINVGY RPTVEKTKKI KYEVYILDFS ADLYGKEIRV EFLEFLRPEL KFSNISELVA QMHEDVKIAR RIIERYENK
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