| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0348 |
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| Symbol | |
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| ID | 5452343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 377479 |
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| End bp | 379332 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640874094 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001409870 |
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| Protein GI | 154249045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.663793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGT GGTTAGTAGT TATCCTTGGT ATTTTTGTGG CAATTTTGGC ACTTGCGGCA
TTTGACCCAA CAGTATACGT TGAAGCAACG ATCGGTGAAC CAGATACCCT CGACCCACAT
CTTGCTTACG ATACGTCAAG TGGTGAGGTA CTTTACAACG TTTACGAAAA CCTTATTGCT
TACAAGGGTA GAAGCGTTAG CGAATTCGAA CCAAGATTGG CAACAGAAGT TCCAACAGTA
AAGAACGGAC TTGTCAAAGA CGGTGGAAAG ACATACGTAT TTCCTATTAG AAAGAACGTA
AAGTTCCACA ACGGTAACCT ACTAACACCA GAAGATGTTG AGTACTCATT TGAAAGAGGA
TTGTTGTATG ATCCAGAAGG CGGTCCAATG TGGATGCTCT GGTACGCTAT TTTCGGTGTT
CATTCAAGAG ATGAAGCACT TGAAGAATTC GTTGGTAAAC CTGTCAGTGA AATATTTGAT
GCAAAAACCG GAGAACCAAA AGCAGATTAC AAGCAAAAAG TTATCGATTT CTATAAAAAA
GTAGTTGACC CAGCAATTGA GGTCCAAGGT GACAATGTAG TAATTAAACT TGTCAGACCA
TACGCACCAT TTATGAACAT CATAGCGCAA AGTGCACACT GGGCAGCTAT TCTTGATAAA
GAAACATGTA TAAAACTTGG TTTGTGGGAT GGAAAAGCTG AAACATGGTG GAAATGGAAA
GGCATGCAAA AAGAAGAATC ACCACTTTAC TCATACGCGA TGGGTACAGG ACCATACAAA
TTCGTAGAGT GGGATAGAAA GCAACAAAAA GTTACATTGG TAGCAAACGA AAACTACTGG
AGAGAACCAG CAAAGATTAA GAAAGTTATC ATCTGGGGTA TCGATGAATG GTCAACAAGA
AAAGCAATGC TTGAGAAAGG TGACGCAGAC TCAATAGCTG TTGTTCTTGA ATACCTTGAT
CAACTCAGAG GAAACAAAGA CATTCAAATC ATCGAAAATA TACCAACACT TTCTGTTACA
GTTTTAGCAT TCAACTGGAC AGTTAACACA TCAAGCAAGT ACATTGGTAG TGGTAAACTT
GATGGAAATG GTATAAATCC AGACTTCTTC AGCGATATAT ATGCAAGAAA AGCAGTTGCC
GCAGCAATTA ACTACGATGC ACTTATTAGA GATGTTTTGA AAGGCTTCGG TAAGAGAATA
CCAACAGCTC TTCCAGAAGG ATTACTCGGC TTTGATCCAT CTTTACCACT CTACAAATTC
AACGTTAAAA CTGTACAAGA CAACTTGAAA AAAGCATGGA ATGGTCAAGC ATGGGCAAAA
GGATTCAAAT TCAGTGTAGC ATATAACCAA GGTAACGTAG GAAGGCAAAG AGTTGCTGAA
ATGGTTAAGA TGTACCTTGA AATGGCTGCA CCTGGAAAGG CAAAGATAGA CGTACAACCG
TTGCAATGGC CAACATTCCT TGATGCAACA AAACGTGGTG AATTACCAGT ATTCATCCTT
GGATGGCTTG CAGATTACCC AGACCCAGAT AACTTCATCT TTACATACTA CCACAGCAAC
GGTGATTACT CTGGCAGACA AGGTGAAGGA TTTAGAAAAT TTGTTAGCAC ACCAAGAAAA
GAACTTGGTG GAAAAAGCCT AGATGAACTT ATTGAACAAG CAGCCGCAGA GACAGATCCT
CAAGCACGTG CAAAACTTTA TGTACAGATT CAAAAATTCG TAGTTGACAA TTGTATCAGT
GTCCCAGTAT ATCAACCAAT TGGAGTACGC GTACAAAGAA CCTGGGTCAA AGGTTGGTAC
GATAACCCAA TGAGACCTGG TATGGACTTC TACTCAGTAT ACAAACAACA ATAA
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| Protein sequence | MKKWLVVILG IFVAILALAA FDPTVYVEAT IGEPDTLDPH LAYDTSSGEV LYNVYENLIA
YKGRSVSEFE PRLATEVPTV KNGLVKDGGK TYVFPIRKNV KFHNGNLLTP EDVEYSFERG
LLYDPEGGPM WMLWYAIFGV HSRDEALEEF VGKPVSEIFD AKTGEPKADY KQKVIDFYKK
VVDPAIEVQG DNVVIKLVRP YAPFMNIIAQ SAHWAAILDK ETCIKLGLWD GKAETWWKWK
GMQKEESPLY SYAMGTGPYK FVEWDRKQQK VTLVANENYW REPAKIKKVI IWGIDEWSTR
KAMLEKGDAD SIAVVLEYLD QLRGNKDIQI IENIPTLSVT VLAFNWTVNT SSKYIGSGKL
DGNGINPDFF SDIYARKAVA AAINYDALIR DVLKGFGKRI PTALPEGLLG FDPSLPLYKF
NVKTVQDNLK KAWNGQAWAK GFKFSVAYNQ GNVGRQRVAE MVKMYLEMAA PGKAKIDVQP
LQWPTFLDAT KRGELPVFIL GWLADYPDPD NFIFTYYHSN GDYSGRQGEG FRKFVSTPRK
ELGGKSLDEL IEQAAAETDP QARAKLYVQI QKFVVDNCIS VPVYQPIGVR VQRTWVKGWY
DNPMRPGMDF YSVYKQQ
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